RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C ENV10Q99382 181 aa4.06□□□□□ -1.76
RPT4YOR259C YER145C-AA0A023PYF4 145 aa4.05□□□□□ -1.76
RPT4YOR259C YIL059CP40520 121 aa4.05□□□□□ -1.76
RPT4YOR259C CAX4P53223 239 aa4.05□□□□□ -1.76
RPT4YOR259C COX12Q01519 83 aa4.05□□□□□ -1.76
RPT4YOR259C YDR381C-AQ3E6R5 114 aa4.05□□□□□ -1.76
RPT4YOR259C RAD6P06104 172 aa4.04□□□□□ -1.76
RPT4YOR259C SMP1P38128 452 aa4.04□□□□□ -1.76
RPT4YOR259C SIM1P40472 476 aa4.04□□□□□ -1.76
RPT4YOR259C SRL1Q08673 210 aa4.04□□□□□ -1.76
RPT4YOR259C QCR8P08525 94 aa4.03□□□□□ -1.76
RPT4YOR259C MRPL24P36525 258 aaPredicted RBP4.03□□□□□ -1.76
RPT4YOR259C MIG3P39943 394 aa4.03□□□□□ -1.76
RPT4YOR259C RRT13P40042 185 aa4.03□□□□□ -1.76
RPT4YOR259C YDL186WP48568 277 aa4.03□□□□□ -1.76
RPT4YOR259C YDR029WQ12111 104 aa4.03□□□□□ -1.76
RPT4YOR259C MPC2P38857 129 aa4.02□□□□□ -1.77
RPT4YOR259C KRE9P39005 276 aa4.02□□□□□ -1.77
RPT4YOR259C YNL194CP40169 301 aa4.02□□□□□ -1.77
RPT4YOR259C YFR035CP43608 114 aa4.02□□□□□ -1.77
RPT4YOR259C KNH1P50112 268 aa4.02□□□□□ -1.77
RPT4YOR259C YMR244WQ04018 355 aa4.02□□□□□ -1.77
RPT4YOR259C YOR034C-AQ3E735 80 aa4.02□□□□□ -1.77
RPT4YOR259C HOT13P36078 116 aa4.01□□□□□ -1.77
RPT4YOR259C YHL042WP38729 150 aa4.01□□□□□ -1.77
RPT4YOR259C SVP26P38869 228 aa4.01□□□□□ -1.77
RPT4YOR259C SPG4Q04438 115 aa4.01□□□□□ -1.77
RPT4YOR259C EMC6Q12431 108 aa4.01□□□□□ -1.77
RPT4YOR259C YLR361C-AQ3E795 98 aa4.01□□□□□ -1.77
RPT4YOR259C MSA2P36157 363 aa4□□□□□ -1.77
RPT4YOR259C YCR041WP37265 110 aa4□□□□□ -1.77
RPT4YOR259C YCH1P42937 148 aa4□□□□□ -1.77
RPT4YOR259C PMP3P87284 55 aa4□□□□□ -1.77
RPT4YOR259C MRPS8Q03799 155 aa4□□□□□ -1.77
RPT4YOR259C HOR7Q05827 59 aa4□□□□□ -1.77
RPT4YOR259C ECM12O13529 151 aa3.99□□□□□ -1.77
RPT4YOR259C ARC15P40518 154 aaRIP-Chip data3.99□□□□□ -1.77not detected
RPT4YOR259C RGM1Q00453 211 aa3.99□□□□□ -1.77
RPT4YOR259C YMR295CQ03559 197 aa3.99□□□□□ -1.77
RPT4YOR259C PPT2Q12036 173 aa3.99□□□□□ -1.77
RPT4YOR259C UTP20P35194 2493 aaKnown RBP3.99□□□□□ -1.77
RPT4YOR259C YHL018WP38744 120 aaPredicted RBP3.97□□□□□ -1.77
RPT4YOR259C YPL038W-AQ3E7B4 63 aa3.97□□□□□ -1.77
RPT4YOR259C YLL006W-AQ3E814 58 aa3.97□□□□□ -1.77
RPT4YOR259C YSY6P38374 65 aa3.96□□□□□ -1.77
RPT4YOR259C COX14P39103 70 aa3.96□□□□□ -1.77
RPT4YOR259C SHH4Q06236 168 aa3.96□□□□□ -1.77
RPT4YOR259C YOR020W-AQ3E824 90 aa3.96□□□□□ -1.77
RPT4YOR259C TAR1Q8TGM6 124 aa3.96□□□□□ -1.77
RPT4YOR259C YJR107C-AP0CT86 78 aa3.95□□□□□ -1.78
RPT4YOR259C UBC5P15732 148 aa3.95□□□□□ -1.78
RPT4YOR259C TOM6P33448 61 aa3.95□□□□□ -1.78
RPT4YOR259C RPR2P40571 144 aa3.95□□□□□ -1.78
RPT4YOR259C HAL1Q01766 294 aa3.95□□□□□ -1.78
RPT4YOR259C RPL2AP0CX45 254 aaKnown RBP3.95□□□□□ -1.78
RPT4YOR259C RPL2BP0CX46 254 aaKnown RBP3.95□□□□□ -1.78
RPT4YOR259C RPS11AP0CX47 156 aaKnown RBP3.95□□□□□ -1.78
RPT4YOR259C RPS11BP0CX48 156 aaKnown RBP3.95□□□□□ -1.78
RPT4YOR259C YBR219CP38317 127 aa3.95□□□□□ -1.78
RPT4YOR259C IRC21Q04772 201 aa3.95□□□□□ -1.78
RPT4YOR259C VAM10Q08474 114 aa3.95□□□□□ -1.78
RPT4YOR259C YLR236CA0A023PZG4 107 aa3.94□□□□□ -1.78
RPT4YOR259C YAR029WP39549 74 aa3.94□□□□□ -1.78
RPT4YOR259C ALG13P53178 202 aa3.94□□□□□ -1.78
RPT4YOR259C MPC3P53311 146 aa3.94□□□□□ -1.78
RPT4YOR259C YLR285C-AQ3E771 56 aa3.94□□□□□ -1.78
RPT4YOR259C YER039C-AP0CD97 72 aa3.93□□□□□ -1.78
RPT4YOR259C YPS5P53057 165 aa3.93□□□□□ -1.78
RPT4YOR259C EDC1P53080 175 aaPredicted RBP3.93□□□□□ -1.78
RPT4YOR259C YLR281CQ05863 155 aa3.93□□□□□ -1.78
RPT4YOR259C DYN1P36022 4092 aa3.92□□□□□ -1.78
RPT4YOR259C ATP18P81450 59 aa3.92□□□□□ -1.78
RPT4YOR259C YLR156WP0CE96 114 aa3.91□□□□□ -1.78
RPT4YOR259C YLR159WP0CE97 114 aa3.91□□□□□ -1.78
RPT4YOR259C YLR161WP0CE98 114 aa3.91□□□□□ -1.78
RPT4YOR259C YHR212W-AP0CX91 67 aa3.91□□□□□ -1.78
RPT4YOR259C YCR050CP25630 102 aa3.91□□□□□ -1.78
RPT4YOR259C YGR035W-AQ45U48 73 aa3.91□□□□□ -1.78
RPT4YOR259C YER187WP40102 141 aa3.9□□□□□ -1.79
RPT4YOR259C RPL38P49167 78 aaKnown RBP3.89□□□□□ -1.79
RPT4YOR259C ICY1Q04329 127 aa3.89□□□□□ -1.79
RPT4YOR259C YMR122W-AQ3E842 84 aa3.89□□□□□ -1.79
RPT4YOR259C YBR144CP34215 104 aa3.88□□□□□ -1.79
RPT4YOR259C CRC1Q12289 327 aa3.88□□□□□ -1.79
RPT4YOR259C TSC3Q3E790 80 aa3.88□□□□□ -1.79
RPT4YOR259C YAL065CO13511 128 aa3.87□□□□□ -1.79
RPT4YOR259C YRA2P36036 203 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
RPT4YOR259C ATP20Q12233 115 aa3.87□□□□□ -1.79
RPT4YOR259C YBR126W-AQ8TGU7 68 aa3.87□□□□□ -1.79
RPT4YOR259C YCR001WP25347 104 aa3.86□□□□□ -1.79
RPT4YOR259C AIM4P38305 123 aaPredicted RBP3.86□□□□□ -1.79
RPT4YOR259C SMD1Q02260 146 aaPredicted RBP3.86□□□□□ -1.79
RPT4YOR259C YFR009W-AP0C5M9 85 aa3.85□□□□□ -1.79
RPT4YOR259C TDA2P40045 126 aa3.85□□□□□ -1.79
RPT4YOR259C SBH1P52870 82 aa3.85□□□□□ -1.79
RPT4YOR259C ERI1P62651 68 aaKnown RBP3.85□□□□□ -1.79
RPT4YOR259C YDR246W-AQ3E763 66 aa3.85□□□□□ -1.79
RPT4YOR259C YGR240C-AQ3E786 66 aa3.85□□□□□ -1.79
RPT4YOR259C BET1P22804 142 aa3.84□□□□□ -1.79
RPT4YOR259C RSM18P40033 138 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms