RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YMR295CQ03559 197 aa4.88□□□□□ -1.63
HDA1YNL021W FIT2Q08906 153 aa4.88□□□□□ -1.63
HDA1YNL021W NUM1Q00402 2748 aa4.88□□□□□ -1.63
HDA1YNL021W ECM12O13529 151 aa4.87□□□□□ -1.63
HDA1YNL021W UBC4P15731 148 aa4.87□□□□□ -1.63
HDA1YNL021W YFR035CP43608 114 aa4.87□□□□□ -1.63
HDA1YNL021W UPS3Q04006 179 aa4.87□□□□□ -1.63
HDA1YNL021W YHR213WP0CI67 198 aa4.86□□□□□ -1.63
HDA1YNL021W YNL217WP40152 326 aa4.86□□□□□ -1.63
HDA1YNL021W IRC23Q08416 157 aa4.86□□□□□ -1.63
HDA1YNL021W MEC1P38111 2368 aa4.86□□□□□ -1.63
HDA1YNL021W INO4P13902 151 aa4.85□□□□□ -1.63
HDA1YNL021W YHL042WP38729 150 aa4.85□□□□□ -1.63
HDA1YNL021W MSL1P40567 111 aaPredicted RBP4.85□□□□□ -1.63
HDA1YNL021W ATP19P81451 68 aa4.85□□□□□ -1.63
HDA1YNL021W YOR105WQ08504 108 aa4.85□□□□□ -1.63
HDA1YNL021W MIC10Q96VH5 97 aa4.85□□□□□ -1.63
HDA1YNL021W TRA1P38811 3744 aa4.84□□□□□ -1.63
HDA1YNL021W SCS22Q6Q595 175 aa4.84□□□□□ -1.63
HDA1YNL021W SNF11P38956 169 aa4.84□□□□□ -1.64
HDA1YNL021W TDA2P40045 126 aa4.84□□□□□ -1.64
HDA1YNL021W TOM7P53507 60 aa4.84□□□□□ -1.64
HDA1YNL021W SSS1P35179 80 aa4.83□□□□□ -1.64
HDA1YNL021W LIP1Q03579 150 aa4.83□□□□□ -1.64
HDA1YNL021W YNR034W-AQ3E841 98 aa4.83□□□□□ -1.64
HDA1YNL021W COA6Q3E846 104 aa4.83□□□□□ -1.64
HDA1YNL021W MIG1P27705 504 aa4.82□□□□□ -1.64
HDA1YNL021W YKL044WP36092 106 aa4.82□□□□□ -1.64
HDA1YNL021W CWP2P43497 92 aa4.82□□□□□ -1.64
HDA1YNL021W CUE4Q04201 117 aaPredicted RBP4.82□□□□□ -1.64
HDA1YNL021W FUN14P18411 198 aa4.82□□□□□ -1.64
HDA1YNL021W IMP2P46972 177 aa4.82□□□□□ -1.64
HDA1YNL021W YJR146WP47174 117 aa4.82□□□□□ -1.64
HDA1YNL021W KNH1P50112 268 aa4.82□□□□□ -1.64
HDA1YNL021W HUA1P40325 198 aa4.81□□□□□ -1.64
HDA1YNL021W YFL065CP43539 102 aa4.81□□□□□ -1.64
HDA1YNL021W CYT2Q00873 224 aa4.81□□□□□ -1.64
HDA1YNL021W YPR203WQ08994 102 aa4.81□□□□□ -1.64
HDA1YNL021W RPS22BQ3E7Y3 130 aaKnown RBP4.81□□□□□ -1.64
HDA1YNL021W POR2P40478 281 aa4.81□□□□□ -1.64
HDA1YNL021W RPL33BP41056 107 aaKnown RBP4.8□□□□□ -1.64
HDA1YNL021W URA2P07259 2214 aaKnown RBP4.8□□□□□ -1.64
HDA1YNL021W DAD4P69851 72 aa4.79□□□□□ -1.64
HDA1YNL021W VPS55P47111 140 aa4.79□□□□□ -1.64
HDA1YNL021W YDL241WQ07738 123 aa4.79□□□□□ -1.64
HDA1YNL021W DAD1Q12248 94 aa4.79□□□□□ -1.64
HDA1YNL021W RPL26AP05743 127 aaKnown RBP4.78□□□□□ -1.64
HDA1YNL021W RPL26BP53221 127 aaKnown RBP4.78□□□□□ -1.64
HDA1YNL021W YLR236CA0A023PZG4 107 aa4.78□□□□□ -1.64
HDA1YNL021W HOR7Q05827 59 aa4.78□□□□□ -1.64
HDA1YNL021W MRPL31P14063 131 aaPredicted RBP4.77□□□□□ -1.65
HDA1YNL021W KRE1P17260 313 aa4.77□□□□□ -1.65
HDA1YNL021W THG1P53215 237 aaKnown RBP4.77□□□□□ -1.65
HDA1YNL021W GPI19Q04082 140 aa4.77□□□□□ -1.65
HDA1YNL021W YLR342W-AQ3E810 57 aa4.77□□□□□ -1.65
HDA1YNL021W PAI3P01094 68 aa4.76□□□□□ -1.65
HDA1YNL021W PAU7P39545 55 aa4.75□□□□□ -1.65
HDA1YNL021W YMR141CP40211 102 aa4.75□□□□□ -1.65
HDA1YNL021W QCR10P37299 77 aa4.75□□□□□ -1.65
HDA1YNL021W YHL018WP38744 120 aaPredicted RBP4.75□□□□□ -1.65
HDA1YNL021W YLR296WQ05898 108 aa4.74□□□□□ -1.65
HDA1YNL021W RRT15Q3E811 62 aa4.74□□□□□ -1.65
HDA1YNL021W YIL134C-AQ45U18 67 aa4.74□□□□□ -1.65
HDA1YNL021W YCL042WP25572 119 aa4.73□□□□□ -1.65
HDA1YNL021W YCR085WP25650 117 aa4.73□□□□□ -1.65
HDA1YNL021W SPI1P40092 148 aa4.73□□□□□ -1.65
HDA1YNL021W SOM1Q05676 74 aa4.73□□□□□ -1.65
HDA1YNL021W PRM3Q08931 133 aa4.73□□□□□ -1.65
HDA1YNL021W FYV5P25585 152 aa4.72□□□□□ -1.65
HDA1YNL021W YPR013CQ12145 317 aa4.72□□□□□ -1.65
HDA1YNL021W CCW14O13547 238 aa4.72□□□□□ -1.65
HDA1YNL021W NRG2P38082 220 aa4.72□□□□□ -1.65
HDA1YNL021W RSM19P53733 91 aaPredicted RBP4.72□□□□□ -1.65
HDA1YNL021W HUR1P45820 110 aa4.71□□□□□ -1.66
HDA1YNL021W YPR195CQ06594 109 aa4.71□□□□□ -1.66
HDA1YNL021W YNL146C-AQ3E7Z1 64 aa4.71□□□□□ -1.66
HDA1YNL021W YGR025WP53216 100 aa4.7□□□□□ -1.66
HDA1YNL021W CCW12Q12127 133 aa4.7□□□□□ -1.66
HDA1YNL021W YOR011W-AQ3E807 68 aa4.7□□□□□ -1.66
HDA1YNL021W SVP26P38869 228 aa4.69□□□□□ -1.66
HDA1YNL021W BRP1P53194 125 aa4.69□□□□□ -1.66
HDA1YNL021W YDR042CQ03205 200 aa4.69□□□□□ -1.66
HDA1YNL021W PAU16P35994 123 aa4.69□□□□□ -1.66
HDA1YNL021W YEL067CP39978 195 aa4.69□□□□□ -1.66
HDA1YNL021W YHR022CP38763 256 aa4.68□□□□□ -1.66
HDA1YNL021W PRM7Q12459 698 aa4.68□□□□□ -1.66
HDA1YNL021W RDS3Q06835 107 aaPredicted RBP4.67□□□□□ -1.66
HDA1YNL021W YER187WP40102 141 aa4.67□□□□□ -1.66
HDA1YNL021W EMC6Q12431 108 aa4.67□□□□□ -1.66
HDA1YNL021W YLR363W-AQ3E747 85 aa4.67□□□□□ -1.66
HDA1YNL021W SEC11P15367 167 aa4.66□□□□□ -1.66
HDA1YNL021W POP3P53833 195 aaPredicted RBP4.66□□□□□ -1.66
HDA1YNL021W ENV10Q99382 181 aa4.66□□□□□ -1.66
HDA1YNL021W RPA12P32529 125 aaKnown RBP4.66□□□□□ -1.66
HDA1YNL021W UTR5P32630 166 aa4.65□□□□□ -1.67
HDA1YNL021W YHR212W-AP0CX91 67 aa4.64□□□□□ -1.67
HDA1YNL021W YBR209WP38311 105 aa4.64□□□□□ -1.67
HDA1YNL021W YIL014C-AQ02598 104 aa4.64□□□□□ -1.67
HDA1YNL021W YPL261CQ08976 102 aa4.64□□□□□ -1.67
HDA1YNL021W YMR175W-AQ3E766 64 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms