RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C RGM1Q00453 211 aa4.21□□□□□ -1.74
VBA1YMR088C RRT1P38192 103 aa4.2□□□□□ -1.74
VBA1YMR088C YHR022CP38763 256 aa4.2□□□□□ -1.74
VBA1YMR088C MPC2P38857 129 aa4.2□□□□□ -1.74
VBA1YMR088C RPL26BP53221 127 aaKnown RBP4.2□□□□□ -1.74
VBA1YMR088C RPS23AP0CX29 145 aaKnown RBP4.19□□□□□ -1.74
VBA1YMR088C RPS23BP0CX30 145 aa4.19□□□□□ -1.74
VBA1YMR088C DCV1P43595 202 aa4.19□□□□□ -1.74
VBA1YMR088C SED1Q01589 338 aa4.19□□□□□ -1.74
VBA1YMR088C YMR122CQ03879 124 aa4.19□□□□□ -1.74
VBA1YMR088C YNR077CP53758 84 aa4.19□□□□□ -1.74
VBA1YMR088C SRL1Q08673 210 aa4.19□□□□□ -1.74
VBA1YMR088C YLR285C-AQ3E771 56 aa4.19□□□□□ -1.74
VBA1YMR088C VPS68Q12016 184 aa4.18□□□□□ -1.74
VBA1YMR088C MIG3P39943 394 aa4.17□□□□□ -1.74
VBA1YMR088C YEL067CP39978 195 aa4.17□□□□□ -1.74
VBA1YMR088C YMR007WQ03675 126 aa4.17□□□□□ -1.74
VBA1YMR088C YPL278CQ08990 100 aa4.17□□□□□ -1.74
VBA1YMR088C YOR192C-CQ3E736 78 aa4.17□□□□□ -1.74
VBA1YMR088C YBL071CP38185 102 aa4.16□□□□□ -1.74
VBA1YMR088C RPR2P40571 144 aa4.16□□□□□ -1.74
VBA1YMR088C YGR035W-AQ45U48 73 aa4.16□□□□□ -1.74
VBA1YMR088C FLO9P39712 1322 aa4.16□□□□□ -1.74
VBA1YMR088C ERG2P32352 222 aa4.16□□□□□ -1.74
VBA1YMR088C MSA2P36157 363 aa4.16□□□□□ -1.74
VBA1YMR088C YGR269WP40326 108 aa4.16□□□□□ -1.74
VBA1YMR088C YFL015CP43578 164 aa4.16□□□□□ -1.74
VBA1YMR088C YPR153WQ06537 140 aa4.16□□□□□ -1.74
VBA1YMR088C TMC1Q08422 150 aaPredicted RBP4.16□□□□□ -1.74
VBA1YMR088C SRX1P36077 127 aa4.15□□□□□ -1.75
VBA1YMR088C RPL36BO14455 100 aaKnown RBP4.14□□□□□ -1.75
VBA1YMR088C RPL36AP05745 100 aaPredicted RBP4.14□□□□□ -1.75
VBA1YMR088C PAU7P39545 55 aa4.14□□□□□ -1.75
VBA1YMR088C ARC15P40518 154 aaRIP-Chip data4.14□□□□□ -1.75not detected
VBA1YMR088C YIR020CP40575 100 aa4.13□□□□□ -1.75
VBA1YMR088C EDC1P53080 175 aaPredicted RBP4.13□□□□□ -1.75
VBA1YMR088C YDR182W-AQ3E796 67 aa4.13□□□□□ -1.75
VBA1YMR088C COA3Q3E7B2 85 aa4.13□□□□□ -1.75
VBA1YMR088C YER145C-AA0A023PYF4 145 aa4.12□□□□□ -1.75
VBA1YMR088C YGL149WP53116 101 aa4.12□□□□□ -1.75
VBA1YMR088C YHL037CP38733 133 aa4.11□□□□□ -1.75
VBA1YMR088C SPC1P46965 94 aa4.11□□□□□ -1.75
VBA1YMR088C YLR194CQ05777 254 aa4.11□□□□□ -1.75
VBA1YMR088C COX14P39103 70 aa4.1□□□□□ -1.75
VBA1YMR088C PRM7Q12459 698 aa4.1□□□□□ -1.75
VBA1YMR088C REE1P40893 198 aa4.1□□□□□ -1.75
VBA1YMR088C CDC39P25655 2108 aaKnown RBP4.09□□□□□ -1.75
VBA1YMR088C FLO1P32768 1537 aa4.09□□□□□ -1.75
VBA1YMR088C IRC21Q04772 201 aa4.09□□□□□ -1.76
VBA1YMR088C YCR095W-AQ3E787 52 aa4.09□□□□□ -1.76
VBA1YMR088C YDL022C-AP0C5L6 82 aa4.08□□□□□ -1.76
VBA1YMR088C COX23P38824 151 aa4.08□□□□□ -1.76
VBA1YMR088C YDL241WQ07738 123 aa4.08□□□□□ -1.76
VBA1YMR088C SNA2P56508 79 aa4.07□□□□□ -1.76
VBA1YMR088C YOL029CQ08187 201 aa4.07□□□□□ -1.76
VBA1YMR088C NOP10Q6Q547 58 aaPredicted RBP4.07□□□□□ -1.76
VBA1YMR088C YJL197C-AP0C5P0 93 aa4.06□□□□□ -1.76
VBA1YMR088C RPS30AP0CX33 63 aaKnown RBP4.06□□□□□ -1.76
VBA1YMR088C RPS30BP0CX34 63 aaKnown RBP4.06□□□□□ -1.76
VBA1YMR088C HSP150P32478 413 aa4.06□□□□□ -1.76
VBA1YMR088C MRPL38P35996 138 aaPredicted RBP4.06□□□□□ -1.76
VBA1YMR088C HOT13P36078 116 aa4.06□□□□□ -1.76
VBA1YMR088C FIG2P25653 1609 aa4.06□□□□□ -1.76
VBA1YMR088C RTC6O14464 93 aa4.05□□□□□ -1.76
VBA1YMR088C KRE9P39005 276 aa4.05□□□□□ -1.76
VBA1YMR088C HMRA2P0CY13 119 aa4.04□□□□□ -1.76
VBA1YMR088C YDR010CQ12426 110 aa4.04□□□□□ -1.76
VBA1YMR088C YIL156W-BQ2V2P4 73 aa4.04□□□□□ -1.76
VBA1YMR088C MRX7P53869 86 aa4.03□□□□□ -1.76
VBA1YMR088C MGR2Q02889 113 aa4.03□□□□□ -1.76
VBA1YMR088C YOL166W-AQ8TGJ1 51 aa4.03□□□□□ -1.76
VBA1YMR088C YKR032WP36127 104 aa4.03□□□□□ -1.76
VBA1YMR088C YOR032W-AQ8TGS1 66 aa4.03□□□□□ -1.76
VBA1YMR088C HUG1Q6Q5K6 68 aa4.02□□□□□ -1.77
VBA1YMR088C YMR244WQ04018 355 aa4.01□□□□□ -1.77
VBA1YMR088C SHU1P38751 150 aa4□□□□□ -1.77
VBA1YMR088C HUA1P40325 198 aa4□□□□□ -1.77
VBA1YMR088C POR2P40478 281 aa4□□□□□ -1.77
VBA1YMR088C BSC4P53841 131 aa4□□□□□ -1.77
VBA1YMR088C YMR321CQ04898 105 aa4□□□□□ -1.77
VBA1YMR088C YPR013CQ12145 317 aa4□□□□□ -1.77
VBA1YMR088C TOM7P53507 60 aa4□□□□□ -1.77
VBA1YMR088C YOR034C-AQ3E735 80 aa4□□□□□ -1.77
VBA1YMR088C BPH1P25356 2167 aa3.99□□□□□ -1.77
VBA1YMR088C YNL190WP53872 204 aa3.99□□□□□ -1.77
VBA1YMR088C YER078W-AQ3E7A2 54 aa3.99□□□□□ -1.77
VBA1YMR088C YPR108W-AQ3E7B3 70 aa3.99□□□□□ -1.77
VBA1YMR088C QCR8P08525 94 aa3.98□□□□□ -1.77
VBA1YMR088C TOS6P48560 102 aa3.98□□□□□ -1.77
VBA1YMR088C API2Q04413 109 aa3.98□□□□□ -1.77
VBA1YMR088C CCW14O13547 238 aa3.97□□□□□ -1.77
VBA1YMR088C YHR125WP38831 101 aa3.97□□□□□ -1.77
VBA1YMR088C YNL208WP40159 199 aaKnown RBP3.97□□□□□ -1.77
VBA1YMR088C FIT2Q08906 153 aa3.97□□□□□ -1.77
VBA1YMR088C YLR111WQ12528 110 aa3.97□□□□□ -1.77
VBA1YMR088C HUB1Q6Q546 73 aa3.97□□□□□ -1.77
VBA1YMR088C IGD1P43598 195 aa3.97□□□□□ -1.77
VBA1YMR088C YNL042W-BQ3E7Z2 85 aa3.97□□□□□ -1.77
VBA1YMR088C YLR236CA0A023PZG4 107 aa3.96□□□□□ -1.78
VBA1YMR088C YJR107C-AP0CT86 78 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms