RNA–Protein interactions for RNA: YLR371W

ROM2, Transcript of GDP/GTP exchange factor (GEF) for Rho1p and Rho2p, yeast

Gene ROM2, Length 4,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROM2	YLR371W	ATG8	P38182	117 aa	RIP-Chip data	0.74	□□□□□ -2.29	not detected
ROM2	YLR371W	TEM1	P38987	245 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	RGM1	Q00453	211 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	LIP1	Q03579	150 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	PCC1	Q3E833	88 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YOL085C	Q99345	113 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	PAU16	P35994	123 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YHR022C	P38763	256 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YIL059C	P40520	121 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	CDC40	P40968	455 aa	Predicted RBP	0.74	□□□□□ -2.29
ROM2	YLR371W	APS2	Q00381	147 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	UPS3	Q04006	179 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	PRM7	Q12459	698 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	MRPL31	P14063	131 aa	Predicted RBP	0.74	□□□□□ -2.29
ROM2	YLR371W	MRPS9	P38120	278 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	RRT1	P38192	103 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	MPC2	P38857	129 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	CYB5	P40312	120 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	ARC15	P40518	154 aa	RIP-Chip data	0.74	□□□□□ -2.29	not detected
ROM2	YLR371W	VAM10	Q08474	114 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	FCF2	Q12035	217 aa	Predicted RBP	0.74	□□□□□ -2.29
ROM2	YLR371W	YFL041W-A	Q3E817	63 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YGR035W-A	Q45U48	73 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YLR156W	P0CE96	114 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YLR159W	P0CE97	114 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YLR161W	P0CE98	114 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	YHL018W	P38744	120 aa	Predicted RBP	0.74	□□□□□ -2.29
ROM2	YLR371W	VMA21	P41806	77 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	COF1	Q03048	143 aa	Known RBP	0.74	□□□□□ -2.29
ROM2	YLR371W	MRPS8	Q03799	155 aa		0.74	□□□□□ -2.29
ROM2	YLR371W	UGX2	P32772	223 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YPI1	P43587	155 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YBR200W-A	Q3E755	54 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YLR342W-A	Q3E810	57 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YBR027C	P38220	110 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YER134C	P40081	178 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YPL073C	P40323	161 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YFR045W	P43617	309 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	HUR1	P45820	110 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YNL184C	P53876	108 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YMR320W	Q04897	101 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YOR020W-A	Q3E824	90 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YLL066W-B	Q8TGJ7	56 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YCR085W	P25650	117 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	MSL1	P40567	111 aa	Predicted RBP	0.73	□□□□□ -2.29
ROM2	YLR371W	PAU5	P43575	122 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	ICS3	P47034	131 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	OST3	P48439	350 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YDR042C	Q03205	200 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	SME1	Q12330	94 aa	Predicted RBP	0.73	□□□□□ -2.29
ROM2	YLR371W	YDR182W-A	Q3E796	67 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YOR011W-A	Q3E807	68 aa		0.73	□□□□□ -2.29
ROM2	YLR371W	YDL022C-A	P0C5L6	82 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	HSP12	P22943	109 aa	Known RBP	0.72	□□□□□ -2.29
ROM2	YLR371W	MGR2	Q02889	113 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	HMRA1	P0CY11	126 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	SEC11	P15367	167 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	DAD4	P69851	72 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	YIL014C-A	Q02598	104 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	YDR210W	Q03482	75 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	YLR281C	Q05863	155 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	YIL102C-A	Q2V2P5	75 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	RPS11A	P0CX47	156 aa	Known RBP	0.72	□□□□□ -2.29
ROM2	YLR371W	RPS11B	P0CX48	156 aa	Known RBP	0.72	□□□□□ -2.29
ROM2	YLR371W	CNL1	Q06333	122 aa		0.72	□□□□□ -2.29
ROM2	YLR371W	YGR039W	P53225	103 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	TIM22	Q12328	207 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	YOL166W-A	Q8TGJ1	51 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	DAD3	P69850	94 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	NAT3	Q06504	195 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	YOR105W	Q08504	108 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	COA3	Q3E7B2	85 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	FUN14	P18411	198 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	YGL010W	P25338	174 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	YCR001W	P25347	104 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	RPB11	P38902	120 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	GPI19	Q04082	140 aa		0.71	□□□□□ -2.3
ROM2	YLR371W	PFY1	P07274	126 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	SKI6	P46948	246 aa	Predicted RBP	0.7	□□□□□ -2.3
ROM2	YLR371W	YJR146W	P47174	117 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YMR103C	Q04436	120 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YLR042C	Q07990	161 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YBL112C	Q3E7Y4	105 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	ANB1	P19211	157 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YKL075C	P36083	450 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	DAD1	Q12248	94 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	SMT3	Q12306	101 aa	Known RBP	0.7	□□□□□ -2.3
ROM2	YLR371W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.7	□□□□□ -2.3
ROM2	YLR371W	QCR8	P08525	94 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.7	□□□□□ -2.3	not detected
ROM2	YLR371W	YHR125W	P38831	101 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	TOS6	P48560	102 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	KNH1	P50112	268 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YGL149W	P53116	101 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	MRPS12	P53732	153 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	SEN15	Q04675	128 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	YOR314W	Q12506	109 aa		0.7	□□□□□ -2.3
ROM2	YLR371W	RPL33A	P05744	107 aa	Known RBP	0.69	□□□□□ -2.3
ROM2	YLR371W	RPL33B	P41056	107 aa	Known RBP	0.69	□□□□□ -2.3
ROM2	YLR371W	THG1	P53215	237 aa	Known RBP	0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms