RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W TMC1Q08422 150 aaPredicted RBP3.35□□□□□ -1.87
NUP2YLR335W EMC6Q12431 108 aa3.35□□□□□ -1.87
NUP2YLR335W FMP27Q06179 2628 aa3.35□□□□□ -1.87
NUP2YLR335W RPL2AP0CX45 254 aaKnown RBP3.35□□□□□ -1.87
NUP2YLR335W RPL2BP0CX46 254 aaKnown RBP3.35□□□□□ -1.87
NUP2YLR335W RPS11AP0CX47 156 aaKnown RBP3.35□□□□□ -1.87
NUP2YLR335W RPS11BP0CX48 156 aaKnown RBP3.35□□□□□ -1.87
NUP2YLR335W TOA2P32774 122 aa3.35□□□□□ -1.87
NUP2YLR335W YDR119W-AQ2V2P9 66 aa3.35□□□□□ -1.87
NUP2YLR335W TOR1P35169 2470 aa3.35□□□□□ -1.87
NUP2YLR335W SMP1P38128 452 aa3.34□□□□□ -1.87
NUP2YLR335W COX14P39103 70 aa3.34□□□□□ -1.87
NUP2YLR335W UBC11P52492 156 aa3.34□□□□□ -1.87
NUP2YLR335W ALG13P53178 202 aa3.34□□□□□ -1.87
NUP2YLR335W CAX4P53223 239 aa3.34□□□□□ -1.87
NUP2YLR335W YIL059CP40520 121 aa3.34□□□□□ -1.88
NUP2YLR335W ARC15P40518 154 aaRIP-Chip data3.33□□□□□ -1.88 RIP-Chip
NUP2YLR335W YGL088WP53151 121 aa3.33□□□□□ -1.88
NUP2YLR335W SRL1Q08673 210 aa3.33□□□□□ -1.88
NUP2YLR335W YPL038W-AQ3E7B4 63 aa3.33□□□□□ -1.88
NUP2YLR335W YPL229WQ99395 206 aa3.33□□□□□ -1.88
NUP2YLR335W YMR295CQ03559 197 aa3.32□□□□□ -1.88
NUP2YLR335W YLR236CA0A023PZG4 107 aa3.32□□□□□ -1.88
NUP2YLR335W TOM6P33448 61 aa3.32□□□□□ -1.88
NUP2YLR335W ERI1P62651 68 aaKnown RBP3.32□□□□□ -1.88
NUP2YLR335W YJR107C-AP0CT86 78 aa3.31□□□□□ -1.88
NUP2YLR335W YPS5P53057 165 aa3.31□□□□□ -1.88
NUP2YLR335W YDL241WQ07738 123 aa3.31□□□□□ -1.88
NUP2YLR335W VAM10Q08474 114 aa3.31□□□□□ -1.88
NUP2YLR335W YGR240C-AQ3E786 66 aa3.31□□□□□ -1.88
NUP2YLR335W YLL006W-AQ3E814 58 aa3.31□□□□□ -1.88
NUP2YLR335W YMR122W-AQ3E842 84 aa3.31□□□□□ -1.88
NUP2YLR335W ECM12O13529 151 aa3.3□□□□□ -1.88
NUP2YLR335W YSY6P38374 65 aa3.3□□□□□ -1.88
NUP2YLR335W NUM1Q00402 2748 aa3.3□□□□□ -1.88
NUP2YLR335W KRE9P39005 276 aa3.29□□□□□ -1.88
NUP2YLR335W YFR035CP43608 114 aa3.29□□□□□ -1.88
NUP2YLR335W IRC21Q04772 201 aa3.29□□□□□ -1.88
NUP2YLR335W YER145C-AA0A023PYF4 145 aa3.29□□□□□ -1.88
NUP2YLR335W ERG28P40030 148 aa3.29□□□□□ -1.88
NUP2YLR335W ICY1Q04329 127 aa3.29□□□□□ -1.88
NUP2YLR335W YDR029WQ12111 104 aa3.29□□□□□ -1.88
NUP2YLR335W YMR175W-AQ3E766 64 aa3.29□□□□□ -1.88
NUP2YLR335W TAR1Q8TGM6 124 aa3.29□□□□□ -1.88
NUP2YLR335W Q0297Q9ZZV8 51 aa3.29□□□□□ -1.88
NUP2YLR335W RPL29P05747 59 aaPredicted RBP3.28□□□□□ -1.88
NUP2YLR335W YLR361C-AQ3E795 98 aa3.28□□□□□ -1.88
NUP2YLR335W YBL112CQ3E7Y4 105 aa3.28□□□□□ -1.88
NUP2YLR335W KNH1P50112 268 aa3.28□□□□□ -1.88
NUP2YLR335W YBR219CP38317 127 aa3.27□□□□□ -1.89
NUP2YLR335W YAL065CO13511 128 aa3.27□□□□□ -1.89
NUP2YLR335W RSM19P53733 91 aaPredicted RBP3.27□□□□□ -1.89
NUP2YLR335W ATP18P81450 59 aa3.27□□□□□ -1.89
NUP2YLR335W TSC3Q3E790 80 aa3.27□□□□□ -1.89
NUP2YLR335W YPR010C-AA5Z2X5 72 aa3.26□□□□□ -1.89
NUP2YLR335W RPB9P27999 122 aa3.26□□□□□ -1.89
NUP2YLR335W YHL018WP38744 120 aaPredicted RBP3.26□□□□□ -1.89
NUP2YLR335W GAT4P40569 121 aa3.26□□□□□ -1.89
NUP2YLR335W RDS3Q06835 107 aaPredicted RBP3.25□□□□□ -1.89
NUP2YLR335W YOR034C-AQ3E735 80 aa3.25□□□□□ -1.89
NUP2YLR335W YKL183C-AQ3E765 70 aa3.25□□□□□ -1.89
NUP2YLR335W YLR285C-AQ3E771 56 aa3.25□□□□□ -1.89
NUP2YLR335W YLR415CO13578 112 aa3.24□□□□□ -1.89
NUP2YLR335W RPL26AP05743 127 aaKnown RBP3.24□□□□□ -1.89
NUP2YLR335W YBR144CP34215 104 aa3.24□□□□□ -1.89
NUP2YLR335W YCR041WP37265 110 aa3.24□□□□□ -1.89
NUP2YLR335W RPC10P40422 70 aa3.24□□□□□ -1.89
NUP2YLR335W SFT1P43682 97 aa3.24□□□□□ -1.89
NUP2YLR335W RPL26BP53221 127 aaKnown RBP3.24□□□□□ -1.89
NUP2YLR335W HAL1Q01766 294 aa3.24□□□□□ -1.89
NUP2YLR335W YBR182C-AQ8TGU6 64 aa3.24□□□□□ -1.89
NUP2YLR335W YHR212W-AP0CX91 67 aa3.24□□□□□ -1.89
NUP2YLR335W MPC3P53311 146 aa3.24□□□□□ -1.89
NUP2YLR335W MVB12P42939 101 aa3.23□□□□□ -1.89
NUP2YLR335W CRC1Q12289 327 aa3.23□□□□□ -1.89
NUP2YLR335W YER187WP40102 141 aa3.22□□□□□ -1.89
NUP2YLR335W YDR274CP87283 123 aa3.22□□□□□ -1.89
NUP2YLR335W YBL039W-BP0C268 59 aa3.22□□□□□ -1.89
NUP2YLR335W YFL019CP43576 117 aa3.22□□□□□ -1.89
NUP2YLR335W TOR2P32600 2474 aaKnown RBP3.21□□□□□ -1.9
NUP2YLR335W BPH1P25356 2167 aa3.21□□□□□ -1.9
NUP2YLR335W YLR156WP0CE96 114 aa3.21□□□□□ -1.9
NUP2YLR335W YLR159WP0CE97 114 aa3.21□□□□□ -1.9
NUP2YLR335W YLR161WP0CE98 114 aa3.21□□□□□ -1.9
NUP2YLR335W YRA2P36036 203 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
NUP2YLR335W TDA2P40045 126 aa3.21□□□□□ -1.9
NUP2YLR335W SMD1Q02260 146 aaPredicted RBP3.21□□□□□ -1.9
NUP2YLR335W YER039C-AP0CD97 72 aa3.21□□□□□ -1.9
NUP2YLR335W YCR050CP25630 102 aa3.21□□□□□ -1.9
NUP2YLR335W SBH1P52870 82 aa3.21□□□□□ -1.9
NUP2YLR335W YLR122CQ12312 125 aa3.21□□□□□ -1.9
NUP2YLR335W YFR009W-AP0C5M9 85 aa3.2□□□□□ -1.9
NUP2YLR335W AQY2P0CD90 149 aa3.2□□□□□ -1.9
NUP2YLR335W UBC4P15731 148 aa3.2□□□□□ -1.9
NUP2YLR335W KTI11Q3E840 82 aa3.2□□□□□ -1.9
NUP2YLR335W YCR001WP25347 104 aa3.19□□□□□ -1.9
NUP2YLR335W AIM4P38305 123 aaPredicted RBP3.19□□□□□ -1.9
NUP2YLR335W YMR320WQ04897 101 aa3.19□□□□□ -1.9
NUP2YLR335W RPL33AP05744 107 aaKnown RBP3.19□□□□□ -1.9
NUP2YLR335W FYV5P25585 152 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms