RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YHL005CP38752 130 aa4.22□□□□□ -1.73
VPS1YKR001C CRC1Q12289 327 aa4.22□□□□□ -1.73
VPS1YKR001C YHR173CP38864 112 aa4.21□□□□□ -1.74
VPS1YKR001C EDC2P40023 145 aaPredicted RBP4.21□□□□□ -1.74
VPS1YKR001C FYV12Q08559 129 aa4.21□□□□□ -1.74
VPS1YKR001C PPT2Q12036 173 aa4.21□□□□□ -1.74
VPS1YKR001C NCA3P46955 337 aa4.21□□□□□ -1.74
VPS1YKR001C IRC23Q08416 157 aa4.21□□□□□ -1.74
VPS1YKR001C YDR246W-AQ3E763 66 aa4.21□□□□□ -1.74
VPS1YKR001C YCR025CP25352 136 aa4.2□□□□□ -1.74
VPS1YKR001C IMP2P46972 177 aa4.2□□□□□ -1.74
VPS1YKR001C YOR381W-AQ3E804 55 aa4.2□□□□□ -1.74
VPS1YKR001C CCW14O13547 238 aa4.19□□□□□ -1.74
VPS1YKR001C VTC1P40046 129 aaRIP-Chip data4.19□□□□□ -1.74not detected
VPS1YKR001C MTC6P38849 526 aa4.19□□□□□ -1.74
VPS1YKR001C YOR343CQ12484 108 aa4.19□□□□□ -1.74
VPS1YKR001C YAL065CO13511 128 aa4.18□□□□□ -1.74
VPS1YKR001C RPS22AP0C0W1 130 aaKnown RBP4.18□□□□□ -1.74
VPS1YKR001C YNL208WP40159 199 aaKnown RBP4.18□□□□□ -1.74
VPS1YKR001C YBL008W-AQ3E821 79 aa4.18□□□□□ -1.74
VPS1YKR001C QCR10P37299 77 aa4.18□□□□□ -1.74
VPS1YKR001C YBR209WP38311 105 aa4.18□□□□□ -1.74
VPS1YKR001C YOL118CQ08259 102 aa4.18□□□□□ -1.74
VPS1YKR001C YOR314WQ12506 109 aa4.18□□□□□ -1.74
VPS1YKR001C COX9P07255 59 aa4.17□□□□□ -1.74
VPS1YKR001C ERI1P62651 68 aaKnown RBP4.17□□□□□ -1.74
VPS1YKR001C AIM4P38305 123 aaPredicted RBP4.16□□□□□ -1.74
VPS1YKR001C SPI1P40092 148 aa4.16□□□□□ -1.74
VPS1YKR001C CRH1P53301 507 aa4.16□□□□□ -1.74
VPS1YKR001C COA2Q3E823 68 aa4.16□□□□□ -1.74
VPS1YKR001C YGR121W-AQ3E816 71 aa4.16□□□□□ -1.74
VPS1YKR001C AGA1P32323 725 aa4.15□□□□□ -1.74
VPS1YKR001C CTR2P38865 189 aa4.15□□□□□ -1.74
VPS1YKR001C ATP15P21306 62 aa4.15□□□□□ -1.75
VPS1YKR001C YML122CQ03207 126 aa4.15□□□□□ -1.75
VPS1YKR001C YLR162WQ06235 118 aa4.15□□□□□ -1.75
VPS1YKR001C YER145C-AA0A023PYF4 145 aa4.14□□□□□ -1.75
VPS1YKR001C YCR041WP37265 110 aa4.14□□□□□ -1.75
VPS1YKR001C YCR043CP25361 127 aa4.13□□□□□ -1.75
VPS1YKR001C YAR023CD6VPM8 179 aa4.12□□□□□ -1.75
VPS1YKR001C RPL23AP0CX41 137 aaKnown RBP4.12□□□□□ -1.75
VPS1YKR001C RPL23BP0CX42 137 aaKnown RBP4.12□□□□□ -1.75
VPS1YKR001C YIL163CP40448 117 aa4.12□□□□□ -1.75
VPS1YKR001C AIM19P40502 157 aa4.12□□□□□ -1.75
VPS1YKR001C YIR020CP40575 100 aa4.12□□□□□ -1.75
VPS1YKR001C RGM1Q00453 211 aa4.12□□□□□ -1.75
VPS1YKR001C LIP1Q03579 150 aa4.12□□□□□ -1.75
VPS1YKR001C SOM1Q05676 74 aa4.12□□□□□ -1.75
VPS1YKR001C IRC19Q07843 230 aa4.12□□□□□ -1.75
VPS1YKR001C ATP20Q12233 115 aa4.12□□□□□ -1.75
VPS1YKR001C TIM22Q12328 207 aa4.12□□□□□ -1.75
VPS1YKR001C YER188C-AP0C0V2 99 aa4.12□□□□□ -1.75
VPS1YKR001C YLR156WP0CE96 114 aa4.12□□□□□ -1.75
VPS1YKR001C YLR159WP0CE97 114 aa4.12□□□□□ -1.75
VPS1YKR001C YLR161WP0CE98 114 aa4.12□□□□□ -1.75
VPS1YKR001C QCR9P22289 66 aa4.12□□□□□ -1.75
VPS1YKR001C YEL067CP39978 195 aa4.12□□□□□ -1.75
VPS1YKR001C SIP18P50263 79 aa4.12□□□□□ -1.75
VPS1YKR001C SED1Q01589 338 aa4.12□□□□□ -1.75
VPS1YKR001C YOR192C-CQ3E736 78 aa4.12□□□□□ -1.75
VPS1YKR001C OST5Q92316 86 aa4.12□□□□□ -1.75
VPS1YKR001C MIG3P39943 394 aa4.11□□□□□ -1.75
VPS1YKR001C YNR077CP53758 84 aa4.11□□□□□ -1.75
VPS1YKR001C MRP10O75012 95 aa4.1□□□□□ -1.75
VPS1YKR001C MPC3P53311 146 aa4.1□□□□□ -1.75
VPS1YKR001C YKL065W-AQ2V2P2 73 aa4.1□□□□□ -1.75
VPS1YKR001C YOR020W-AQ3E824 90 aa4.1□□□□□ -1.75
VPS1YKR001C YER084WP40057 128 aa4.1□□□□□ -1.75
VPS1YKR001C YPI1P43587 155 aa4.1□□□□□ -1.75
VPS1YKR001C YMR122CQ03879 124 aa4.1□□□□□ -1.75
VPS1YKR001C SRL1Q08673 210 aa4.09□□□□□ -1.75
VPS1YKR001C MSA2P36157 363 aa4.09□□□□□ -1.76
VPS1YKR001C RPR2P40571 144 aa4.09□□□□□ -1.76
VPS1YKR001C RPL26BP53221 127 aaKnown RBP4.09□□□□□ -1.76
VPS1YKR001C YGR035W-AQ45U48 73 aa4.09□□□□□ -1.76
VPS1YKR001C RRT1P38192 103 aa4.08□□□□□ -1.76
VPS1YKR001C YHR022CP38763 256 aa4.08□□□□□ -1.76
VPS1YKR001C YFL015CP43578 164 aa4.08□□□□□ -1.76
VPS1YKR001C RPS23AP0CX29 145 aaKnown RBP4.07□□□□□ -1.76
VPS1YKR001C RPS23BP0CX30 145 aa4.07□□□□□ -1.76
VPS1YKR001C ATP19P81451 68 aa4.07□□□□□ -1.76
VPS1YKR001C MRPS8Q03799 155 aa4.07□□□□□ -1.76
VPS1YKR001C YLR285C-AQ3E771 56 aa4.07□□□□□ -1.76
VPS1YKR001C MPC2P38857 129 aa4.07□□□□□ -1.76
VPS1YKR001C DCV1P43595 202 aa4.07□□□□□ -1.76
VPS1YKR001C YPR053CQ6Q5F3 151 aa4.07□□□□□ -1.76
VPS1YKR001C MDN1Q12019 4910 aaKnown RBP4.07□□□□□ -1.76
VPS1YKR001C YBL071CP38185 102 aa4.06□□□□□ -1.76
VPS1YKR001C YPR153WQ06537 140 aa4.06□□□□□ -1.76
VPS1YKR001C EDC1P53080 175 aaPredicted RBP4.06□□□□□ -1.76
VPS1YKR001C YMR007WQ03675 126 aa4.06□□□□□ -1.76
VPS1YKR001C YGR269WP40326 108 aa4.05□□□□□ -1.76
VPS1YKR001C YDL022C-AP0C5L6 82 aa4.04□□□□□ -1.76
VPS1YKR001C ERG2P32352 222 aa4.03□□□□□ -1.76
VPS1YKR001C RPL36BO14455 100 aaKnown RBP4.02□□□□□ -1.77
VPS1YKR001C RPL36AP05745 100 aaPredicted RBP4.02□□□□□ -1.77
VPS1YKR001C YCL048W-AQ2V2Q2 79 aa4.01□□□□□ -1.77
VPS1YKR001C SPC1P46965 94 aa4.01□□□□□ -1.77
VPS1YKR001C YDL241WQ07738 123 aa4.01□□□□□ -1.77
VPS1YKR001C MRPL38P35996 138 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms