RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W TRP1P00912 224 aa4.86□□□□□ -1.63
GEF1YJR040W RPL18AP0CX49 186 aaKnown RBP4.86□□□□□ -1.63
GEF1YJR040W RPL18BP0CX50 186 aaKnown RBP4.86□□□□□ -1.63
GEF1YJR040W MRPS12P53732 153 aa4.86□□□□□ -1.63
GEF1YJR040W YMR320WQ04897 101 aa4.86□□□□□ -1.63
GEF1YJR040W YOR008C-AQ3E7B9 74 aa4.86□□□□□ -1.63
GEF1YJR040W CCW14O13547 238 aa4.86□□□□□ -1.63
GEF1YJR040W YRA2P36036 203 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
GEF1YJR040W KTI11Q3E840 82 aa4.86□□□□□ -1.63
GEF1YJR040W YSY6P38374 65 aa4.85□□□□□ -1.63
GEF1YJR040W SPG4Q04438 115 aa4.85□□□□□ -1.63
GEF1YJR040W EMC6Q12431 108 aa4.85□□□□□ -1.63
GEF1YJR040W YBR209WP38311 105 aa4.85□□□□□ -1.63
GEF1YJR040W YNL194CP40169 301 aa4.85□□□□□ -1.63
GEF1YJR040W YGR219WP53307 113 aa4.85□□□□□ -1.63
GEF1YJR040W YER187WP40102 141 aa4.84□□□□□ -1.64
GEF1YJR040W URM1P40554 99 aaPredicted RBP4.84□□□□□ -1.64
GEF1YJR040W YMR175W-AQ3E766 64 aa4.84□□□□□ -1.64
GEF1YJR040W KSH1Q8TGJ3 72 aa4.84□□□□□ -1.64
GEF1YJR040W MPC2P38857 129 aa4.83□□□□□ -1.64
GEF1YJR040W URA2P07259 2214 aaKnown RBP4.83□□□□□ -1.64
GEF1YJR040W HOR7Q05827 59 aa4.83□□□□□ -1.64
GEF1YJR040W KEG1P43614 200 aa4.82□□□□□ -1.64
GEF1YJR040W HUR1P45820 110 aa4.82□□□□□ -1.64
GEF1YJR040W YOR011W-AQ3E807 68 aa4.82□□□□□ -1.64
GEF1YJR040W BET1P22804 142 aa4.81□□□□□ -1.64
GEF1YJR040W DCV1P43595 202 aa4.81□□□□□ -1.64
GEF1YJR040W YML122CQ03207 126 aa4.81□□□□□ -1.64
GEF1YJR040W MSA2P36157 363 aa4.81□□□□□ -1.64
GEF1YJR040W YHR022CP38763 256 aa4.81□□□□□ -1.64
GEF1YJR040W PPT2Q12036 173 aa4.81□□□□□ -1.64
GEF1YJR040W YBR200W-AQ3E755 54 aa4.81□□□□□ -1.64
GEF1YJR040W RPL16BP26785 198 aaKnown RBP4.8□□□□□ -1.64
GEF1YJR040W YLR412C-AQ3E742 68 aa4.8□□□□□ -1.64
GEF1YJR040W MRP10O75012 95 aa4.8□□□□□ -1.64
GEF1YJR040W YPR013CQ12145 317 aa4.8□□□□□ -1.64
GEF1YJR040W RPL16AP26784 199 aaKnown RBP4.79□□□□□ -1.64
GEF1YJR040W KRE9P39005 276 aa4.79□□□□□ -1.64
GEF1YJR040W PEX17P40155 199 aa4.79□□□□□ -1.64
GEF1YJR040W TOS8P53147 276 aa4.79□□□□□ -1.64
GEF1YJR040W YGL088WP53151 121 aa4.79□□□□□ -1.64
GEF1YJR040W YLR285C-AQ3E771 56 aa4.79□□□□□ -1.64
GEF1YJR040W YBR126W-AQ8TGU7 68 aa4.79□□□□□ -1.64
GEF1YJR040W YJR146WP47174 117 aa4.78□□□□□ -1.64
GEF1YJR040W YLR281CQ05863 155 aa4.78□□□□□ -1.64
GEF1YJR040W YDR246W-AQ3E763 66 aa4.78□□□□□ -1.64
GEF1YJR040W SFT1P43682 97 aa4.78□□□□□ -1.64
GEF1YJR040W HAL1Q01766 294 aa4.78□□□□□ -1.64
GEF1YJR040W YOR034C-AQ3E735 80 aa4.78□□□□□ -1.64
GEF1YJR040W YCR041WP37265 110 aa4.77□□□□□ -1.65
GEF1YJR040W YER135CP40082 130 aa4.77□□□□□ -1.65
GEF1YJR040W UBC4P15731 148 aa4.76□□□□□ -1.65
GEF1YJR040W SHU1P38751 150 aa4.76□□□□□ -1.65
GEF1YJR040W YGR164WP53291 111 aa4.76□□□□□ -1.65
GEF1YJR040W CCW12Q12127 133 aa4.76□□□□□ -1.65
GEF1YJR040W YGR035W-AQ45U48 73 aa4.76□□□□□ -1.65
GEF1YJR040W YAR029WP39549 74 aa4.75□□□□□ -1.65
GEF1YJR040W YFL019CP43576 117 aa4.75□□□□□ -1.65
GEF1YJR040W YLR156WP0CE96 114 aa4.75□□□□□ -1.65
GEF1YJR040W YLR159WP0CE97 114 aa4.75□□□□□ -1.65
GEF1YJR040W YLR161WP0CE98 114 aa4.75□□□□□ -1.65
GEF1YJR040W YNL146C-AQ3E7Z1 64 aa4.74□□□□□ -1.65
GEF1YJR040W YKL183C-AQ3E765 70 aa4.74□□□□□ -1.65
GEF1YJR040W TDA8Q6B2U8 126 aa4.74□□□□□ -1.65
GEF1YJR040W DIF1O13577 133 aa4.73□□□□□ -1.65
GEF1YJR040W ARC15P40518 154 aaRIP-Chip data4.73□□□□□ -1.65not detected
GEF1YJR040W RRT15Q3E811 62 aa4.73□□□□□ -1.65
GEF1YJR040W AIM4P38305 123 aaPredicted RBP4.73□□□□□ -1.65
GEF1YJR040W MIG3P39943 394 aa4.73□□□□□ -1.65
GEF1YJR040W EDC1P53080 175 aaPredicted RBP4.73□□□□□ -1.65
GEF1YJR040W RGM1Q00453 211 aa4.73□□□□□ -1.65
GEF1YJR040W IRC21Q04772 201 aa4.73□□□□□ -1.65
GEF1YJR040W YFR035CP43608 114 aa4.72□□□□□ -1.65
GEF1YJR040W YNL277W-AQ3E7Z0 62 aa4.72□□□□□ -1.65
GEF1YJR040W YBR144CP34215 104 aa4.72□□□□□ -1.65
GEF1YJR040W ERI1P62651 68 aaKnown RBP4.72□□□□□ -1.65
GEF1YJR040W YEL008WP40001 126 aa4.71□□□□□ -1.66
GEF1YJR040W ATP20Q12233 115 aa4.71□□□□□ -1.66
GEF1YJR040W QCR8P08525 94 aa4.71□□□□□ -1.66
GEF1YJR040W YMR244WQ04018 355 aa4.71□□□□□ -1.66
GEF1YJR040W YOR268CQ08734 132 aa4.71□□□□□ -1.66
GEF1YJR040W YJR107C-AP0CT86 78 aa4.7□□□□□ -1.66
GEF1YJR040W YHR212W-AP0CX91 67 aa4.7□□□□□ -1.66
GEF1YJR040W ICY1Q04329 127 aa4.69□□□□□ -1.66
GEF1YJR040W RSM19P53733 91 aaPredicted RBP4.68□□□□□ -1.66
GEF1YJR040W MRPS8Q03799 155 aa4.68□□□□□ -1.66
GEF1YJR040W RTG1P32607 177 aa4.67□□□□□ -1.66
GEF1YJR040W YLR236CA0A023PZG4 107 aa4.67□□□□□ -1.66
GEF1YJR040W TAR1Q8TGM6 124 aa4.67□□□□□ -1.66
GEF1YJR040W MIC10Q96VH5 97 aa4.65□□□□□ -1.66
GEF1YJR040W PMP3P87284 55 aa4.64□□□□□ -1.67
GEF1YJR040W YMR295CQ03559 197 aa4.64□□□□□ -1.67
GEF1YJR040W RPL38P49167 78 aaKnown RBP4.64□□□□□ -1.67
GEF1YJR040W YDR274CP87283 123 aa4.64□□□□□ -1.67
GEF1YJR040W NOP10Q6Q547 58 aaPredicted RBP4.64□□□□□ -1.67
GEF1YJR040W ICS3P47034 131 aa4.63□□□□□ -1.67
GEF1YJR040W MPC3P53311 146 aa4.63□□□□□ -1.67
GEF1YJR040W GAT4P40569 121 aa4.63□□□□□ -1.67
GEF1YJR040W YAL065CO13511 128 aa4.62□□□□□ -1.67
GEF1YJR040W PEX22P39718 180 aa4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms