RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	PAU18	P0CE91	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU8	P0CE92	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU11	P0CE93	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU13	P38725	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	MSL1	P40567	111 aa	Predicted RBP	3.11	□□□□□ -1.91
UBP7	YIL156W	YIR020C	P40575	100 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU10	Q03050	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU23	Q07987	124 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU20	Q08322	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU17	Q12370	124 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU9	Q3E770	120 aa		3.11	□□□□□ -1.91
UBP7	YIL156W	PAU4	P53427	120 aa		3.1	□□□□□ -1.91
UBP7	YIL156W	QCR8	P08525	94 aa		3.1	□□□□□ -1.91
UBP7	YIL156W	YEL008W	P40001	126 aa		3.09	□□□□□ -1.92
UBP7	YIL156W	RSM19	P53733	91 aa	Predicted RBP	3.09	□□□□□ -1.92
UBP7	YIL156W	YMR082C	Q04276	118 aa		3.09	□□□□□ -1.92
UBP7	YIL156W	HMRA1	P0CY11	126 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	YDR524C-B	Q3E6R4	66 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	PAI3	P01094	68 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	YHR213W	P0CI67	198 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	TIM12	P32830	109 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	PAU16	P35994	123 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	COX23	P38824	151 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	HPA2	Q06592	156 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	COA2	Q3E823	68 aa		3.08	□□□□□ -1.92
UBP7	YIL156W	SRX1	P36077	127 aa		3.07	□□□□□ -1.92
UBP7	YIL156W	RRT15	Q3E811	62 aa		3.07	□□□□□ -1.92
UBP7	YIL156W	YGL014C-A	P0C5N1	53 aa		3.06	□□□□□ -1.92
UBP7	YIL156W	YBR027C	P38220	110 aa		3.06	□□□□□ -1.92
UBP7	YIL156W	YBR219C	P38317	127 aa		3.06	□□□□□ -1.92
UBP7	YIL156W	CDC39	P25655	2108 aa	Known RBP	3.05	□□□□□ -1.92
UBP7	YIL156W	YLR162W	Q06235	118 aa		3.05	□□□□□ -1.92
UBP7	YIL156W	YOR105W	Q08504	108 aa		3.05	□□□□□ -1.92
UBP7	YIL156W	YHR086W-A	Q3E746	53 aa		3.05	□□□□□ -1.92
UBP7	YIL156W	SED1	Q01589	338 aa		3.04	□□□□□ -1.92
UBP7	YIL156W	ECM12	O13529	151 aa		3.04	□□□□□ -1.92
UBP7	YIL156W	YLR363W-A	Q3E747	85 aa		3.04	□□□□□ -1.92
UBP7	YIL156W	LST8	P41318	303 aa		3.04	□□□□□ -1.92
UBP7	YIL156W	RGM1	Q00453	211 aa		3.03	□□□□□ -1.92
UBP7	YIL156W	YHR138C	P38841	114 aa	Predicted RBP	3.03	□□□□□ -1.92
UBP7	YIL156W	YNL198C	P40166	100 aa		3.03	□□□□□ -1.92
UBP7	YIL156W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
UBP7	YIL156W	FAB1	P34756	2278 aa		3.02	□□□□□ -1.93
UBP7	YIL156W	NRG2	P38082	220 aa		3.02	□□□□□ -1.93
UBP7	YIL156W	RPL33A	P05744	107 aa	Known RBP	3.02	□□□□□ -1.93
UBP7	YIL156W	PFY1	P07274	126 aa		3.02	□□□□□ -1.93
UBP7	YIL156W	RPS22A	P0C0W1	130 aa	Known RBP	3.02	□□□□□ -1.93
UBP7	YIL156W	YIL163C	P40448	117 aa		3.02	□□□□□ -1.93
UBP7	YIL156W	QCR9	P22289	66 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	POR2	P40478	281 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	YMR007W	Q03675	126 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.01	□□□□□ -1.93
UBP7	YIL156W	DYN1	P36022	4092 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	VAM10	Q08474	114 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	HUG1	Q6Q5K6	68 aa		3.01	□□□□□ -1.93
UBP7	YIL156W	YCL042W	P25572	119 aa		3	□□□□□ -1.93
UBP7	YIL156W	YMR122C	Q03879	124 aa		3	□□□□□ -1.93
UBP7	YIL156W	COA3	Q3E7B2	85 aa		3	□□□□□ -1.93
UBP7	YIL156W	YNL146C-A	Q3E7Z1	64 aa		3	□□□□□ -1.93
UBP7	YIL156W	AIM4	P38305	123 aa	Predicted RBP	3	□□□□□ -1.93
UBP7	YIL156W	YDR042C	Q03205	200 aa		3	□□□□□ -1.93
UBP7	YIL156W	CYB5	P40312	120 aa		2.99	□□□□□ -1.93
UBP7	YIL156W	YIL102C-A	Q2V2P5	75 aa		2.99	□□□□□ -1.93
UBP7	YIL156W	PRM3	Q08931	133 aa		2.99	□□□□□ -1.93
UBP7	YIL156W	YPR108W-A	Q3E7B3	70 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	HMRA2	P0CY13	119 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	MIC27	P50945	234 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	YOR343C	Q12484	108 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	ATX1	P38636	73 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	YFL065C	P43539	102 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	NCE101	Q02820	53 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	YPR203W	Q08994	102 aa		2.98	□□□□□ -1.93
UBP7	YIL156W	YHL005C	P38752	130 aa		2.97	□□□□□ -1.93
UBP7	YIL156W	POC4	Q12245	148 aa	Predicted RBP	2.97	□□□□□ -1.93
UBP7	YIL156W	YLR285C-A	Q3E771	56 aa		2.97	□□□□□ -1.93
UBP7	YIL156W	YOL118C	Q08259	102 aa		2.96	□□□□□ -1.94
UBP7	YIL156W	YOR192C-C	Q3E736	78 aa		2.96	□□□□□ -1.94
UBP7	YIL156W	HUA1	P40325	198 aa		2.95	□□□□□ -1.94
UBP7	YIL156W	NHP2	P32495	156 aa	Predicted RBP	2.94	□□□□□ -1.94
UBP7	YIL156W	CYR1	P08678	2026 aa	Known RBP	2.93	□□□□□ -1.94
UBP7	YIL156W	YSF3	P0C074	85 aa	Predicted RBP	2.93	□□□□□ -1.94
UBP7	YIL156W	YHR173C	P38864	112 aa		2.92	□□□□□ -1.94
UBP7	YIL156W	RSM18	P40033	138 aa		2.92	□□□□□ -1.94
UBP7	YIL156W	CWP2	P43497	92 aa		2.92	□□□□□ -1.94
UBP7	YIL156W	ROX3	P25046	220 aa		2.92	□□□□□ -1.94
UBP7	YIL156W	TOM7	P53507	60 aa		2.91	□□□□□ -1.94
UBP7	YIL156W	LSM6	Q06406	86 aa	Known RBP	2.91	□□□□□ -1.94
UBP7	YIL156W	YKL023C-A	Q2V2P3	75 aa		2.91	□□□□□ -1.94
UBP7	YIL156W	MRPL31	P14063	131 aa	Predicted RBP	2.91	□□□□□ -1.94
UBP7	YIL156W	PAU7	P39545	55 aa		2.91	□□□□□ -1.94
UBP7	YIL156W	ICY1	Q04329	127 aa		2.91	□□□□□ -1.94
UBP7	YIL156W	YMR175W-A	Q3E766	64 aa		2.9	□□□□□ -1.94
UBP7	YIL156W	IMP2	P46972	177 aa		2.9	□□□□□ -1.95
UBP7	YIL156W	RPS27A	P35997	82 aa	Known RBP	2.89	□□□□□ -1.95
UBP7	YIL156W	RPS27B	P38711	82 aa		2.89	□□□□□ -1.95
UBP7	YIL156W	ENV10	Q99382	181 aa		2.89	□□□□□ -1.95
UBP7	YIL156W	YGL258W-A	Q3E740	77 aa		2.89	□□□□□ -1.95
UBP7	YIL156W	BLM10	P43583	2143 aa		2.89	□□□□□ -1.95
UBP7	YIL156W	RPA12	P32529	125 aa	Known RBP	2.89	□□□□□ -1.95
UBP7	YIL156W	BEM2	P39960	2167 aa	Known RBP	2.88	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms