RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W RPR2P40571 144 aa2.82□□□□□ -1.96
SPT6YGR116W RPL11AP0C0W9 174 aaKnown RBP2.82□□□□□ -1.96
SPT6YGR116W YLR412C-AQ3E742 68 aa2.82□□□□□ -1.96
SPT6YGR116W TAO3P40468 2376 aa2.82□□□□□ -1.96
SPT6YGR116W YML122CQ03207 126 aa2.81□□□□□ -1.96
SPT6YGR116W YER135CP40082 130 aa2.81□□□□□ -1.96
SPT6YGR116W UBC11P52492 156 aa2.81□□□□□ -1.96
SPT6YGR116W ATP18P81450 59 aa2.81□□□□□ -1.96
SPT6YGR116W HAL1Q01766 294 aa2.81□□□□□ -1.96
SPT6YGR116W YLR236CA0A023PZG4 107 aa2.81□□□□□ -1.96
SPT6YGR116W KRE9P39005 276 aa2.81□□□□□ -1.96
SPT6YGR116W TDA2P40045 126 aa2.81□□□□□ -1.96
SPT6YGR116W TOS8P53147 276 aa2.81□□□□□ -1.96
SPT6YGR116W ERG28P40030 148 aa2.8□□□□□ -1.96
SPT6YGR116W YGR164WP53291 111 aa2.8□□□□□ -1.96
SPT6YGR116W ATP20Q12233 115 aa2.8□□□□□ -1.96
SPT6YGR116W YLL006W-AQ3E814 58 aa2.8□□□□□ -1.96
SPT6YGR116W COX14P39103 70 aa2.8□□□□□ -1.96
SPT6YGR116W RSM19P53733 91 aaPredicted RBP2.8□□□□□ -1.96
SPT6YGR116W YLR156WP0CE96 114 aa2.8□□□□□ -1.96
SPT6YGR116W YLR159WP0CE97 114 aa2.8□□□□□ -1.96
SPT6YGR116W YLR161WP0CE98 114 aa2.8□□□□□ -1.96
SPT6YGR116W YLR281CQ05863 155 aa2.8□□□□□ -1.96
SPT6YGR116W RPL11BQ3E757 174 aaPredicted RBP2.8□□□□□ -1.96
SPT6YGR116W YGR025WP53216 100 aa2.79□□□□□ -1.96
SPT6YGR116W YOR314WQ12506 109 aa2.79□□□□□ -1.96
SPT6YGR116W UBC4P15731 148 aa2.79□□□□□ -1.96
SPT6YGR116W YFR035CP43608 114 aa2.79□□□□□ -1.96
SPT6YGR116W YMR295CQ03559 197 aa2.79□□□□□ -1.96
SPT6YGR116W RPL38P49167 78 aaKnown RBP2.78□□□□□ -1.96
SPT6YGR116W ALG13P53178 202 aa2.78□□□□□ -1.96
SPT6YGR116W VAM10Q08474 114 aa2.78□□□□□ -1.96
SPT6YGR116W YOR034C-AQ3E735 80 aa2.78□□□□□ -1.96
SPT6YGR116W MRPS8Q03799 155 aa2.78□□□□□ -1.96
SPT6YGR116W YMR244WQ04018 355 aa2.78□□□□□ -1.96
SPT6YGR116W YBR126W-AQ8TGU7 68 aa2.78□□□□□ -1.96
SPT6YGR116W MIG3P39943 394 aa2.78□□□□□ -1.96
SPT6YGR116W WWM1P43582 211 aaKnown RBP2.77□□□□□ -1.97
SPT6YGR116W ICY1Q04329 127 aa2.77□□□□□ -1.97
SPT6YGR116W RPL26AP05743 127 aaKnown RBP2.77□□□□□ -1.97
SPT6YGR116W SPS100P13130 326 aa2.77□□□□□ -1.97
SPT6YGR116W RPL26BP53221 127 aaKnown RBP2.77□□□□□ -1.97
SPT6YGR116W KSH1Q8TGJ3 72 aa2.77□□□□□ -1.97
SPT6YGR116W MPC3P53311 146 aa2.77□□□□□ -1.97
SPT6YGR116W SPG4Q04438 115 aa2.77□□□□□ -1.97
SPT6YGR116W SPO24Q3E752 67 aa2.77□□□□□ -1.97
SPT6YGR116W ERI1P62651 68 aaKnown RBP2.77□□□□□ -1.97
SPT6YGR116W HOR7Q05827 59 aa2.77□□□□□ -1.97
SPT6YGR116W YMR175W-AQ3E766 64 aa2.76□□□□□ -1.97
SPT6YGR116W YPR013CQ12145 317 aa2.76□□□□□ -1.97
SPT6YGR116W RPS11AP0CX47 156 aaKnown RBP2.75□□□□□ -1.97
SPT6YGR116W RPS11BP0CX48 156 aaKnown RBP2.75□□□□□ -1.97
SPT6YGR116W RTG1P32607 177 aa2.75□□□□□ -1.97
SPT6YGR116W SRL1Q08673 210 aa2.75□□□□□ -1.97
SPT6YGR116W YDR182W-AQ3E796 67 aa2.75□□□□□ -1.97
SPT6YGR116W RPL36BO14455 100 aaKnown RBP2.75□□□□□ -1.97
SPT6YGR116W RPL36AP05745 100 aaPredicted RBP2.75□□□□□ -1.97
SPT6YGR116W RSM18P40033 138 aa2.75□□□□□ -1.97
SPT6YGR116W YMR320WQ04897 101 aa2.75□□□□□ -1.97
SPT6YGR116W YAL065CO13511 128 aa2.75□□□□□ -1.97
SPT6YGR116W SFT1P43682 97 aa2.75□□□□□ -1.97
SPT6YGR116W TIM10P87108 93 aa2.75□□□□□ -1.97
SPT6YGR116W YNL277W-AQ3E7Z0 62 aa2.75□□□□□ -1.97
SPT6YGR116W YPS5P53057 165 aa2.74□□□□□ -1.97
SPT6YGR116W CRC1Q12289 327 aa2.74□□□□□ -1.97
SPT6YGR116W YMR122W-AQ3E842 84 aa2.74□□□□□ -1.97
SPT6YGR116W RPL29P05747 59 aaPredicted RBP2.74□□□□□ -1.97
SPT6YGR116W YDL241WQ07738 123 aa2.74□□□□□ -1.97
SPT6YGR116W EDC1P53080 175 aaPredicted RBP2.74□□□□□ -1.97
SPT6YGR116W YIR020CP40575 100 aa2.73□□□□□ -1.97
SPT6YGR116W YFL019CP43576 117 aa2.73□□□□□ -1.97
SPT6YGR116W YDR246W-AQ3E763 66 aa2.73□□□□□ -1.97
SPT6YGR116W YGL015CP33199 130 aa2.73□□□□□ -1.97
SPT6YGR116W YBR219CP38317 127 aa2.73□□□□□ -1.97
SPT6YGR116W SMD1Q02260 146 aaPredicted RBP2.73□□□□□ -1.97
SPT6YGR116W YFR009W-AP0C5M9 85 aa2.72□□□□□ -1.97
SPT6YGR116W GAT4P40569 121 aa2.72□□□□□ -1.97
SPT6YGR116W AIR2Q12476 344 aaKnown RBP2.72□□□□□ -1.97
SPT6YGR116W YGR240C-AQ3E786 66 aa2.72□□□□□ -1.97
SPT6YGR116W YPR010C-AA5Z2X5 72 aa2.72□□□□□ -1.97
SPT6YGR116W MVB12P42939 101 aa2.72□□□□□ -1.97
SPT6YGR116W YDR034W-BQ6Q5X2 51 aa2.72□□□□□ -1.97
SPT6YGR116W HFA1P32874 2273 aa2.72□□□□□ -1.97
SPT6YGR116W YKL065W-AQ2V2P2 73 aa2.72□□□□□ -1.97
SPT6YGR116W YBL039W-BP0C268 59 aa2.71□□□□□ -1.98
SPT6YGR116W YOR381W-AQ3E804 55 aa2.71□□□□□ -1.98
SPT6YGR116W NOP10Q6Q547 58 aaPredicted RBP2.71□□□□□ -1.98
SPT6YGR116W SPC1P46965 94 aa2.71□□□□□ -1.98
SPT6YGR116W TDA8Q6B2U8 126 aa2.71□□□□□ -1.98
SPT6YGR116W BPH1P25356 2167 aa2.71□□□□□ -1.98
SPT6YGR116W YGL260WP53056 76 aa2.71□□□□□ -1.98
SPT6YGR116W YHL005CP38752 130 aa2.7□□□□□ -1.98
SPT6YGR116W COX23P38824 151 aa2.7□□□□□ -1.98
SPT6YGR116W YIL102CP40488 101 aa2.7□□□□□ -1.98
SPT6YGR116W ICS3P47034 131 aa2.7□□□□□ -1.98
SPT6YGR116W AQY2P0CD90 149 aa2.7□□□□□ -1.98
SPT6YGR116W EDC2P40023 145 aaPredicted RBP2.7□□□□□ -1.98
SPT6YGR116W TMC1Q08422 150 aaPredicted RBP2.7□□□□□ -1.98
SPT6YGR116W FYV5P25585 152 aa2.69□□□□□ -1.98
SPT6YGR116W YLR162WQ06235 118 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms