RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C COX23P38824 151 aa3.65□□□□□ -1.83
SEC9YGR009C RPL26BP53221 127 aaKnown RBP3.65□□□□□ -1.83
SEC9YGR009C RPL36BO14455 100 aaKnown RBP3.64□□□□□ -1.83
SEC9YGR009C RPL36AP05745 100 aaPredicted RBP3.64□□□□□ -1.83
SEC9YGR009C MPC2P38857 129 aa3.64□□□□□ -1.83
SEC9YGR009C YFL051CP43552 160 aa3.64□□□□□ -1.83
SEC9YGR009C YOL029CQ08187 201 aa3.64□□□□□ -1.83
SEC9YGR009C FKS1P38631 1876 aaKnown RBP3.64□□□□□ -1.83
SEC9YGR009C AIM19P40502 157 aa3.63□□□□□ -1.83
SEC9YGR009C YPR153WQ06537 140 aa3.63□□□□□ -1.83
SEC9YGR009C FLO9P39712 1322 aa3.63□□□□□ -1.83
SEC9YGR009C YBL071CP38185 102 aa3.63□□□□□ -1.83
SEC9YGR009C YFL012WP43580 148 aa3.63□□□□□ -1.83
SEC9YGR009C YPI1P43587 155 aa3.63□□□□□ -1.83
SEC9YGR009C YLR194CQ05777 254 aa3.63□□□□□ -1.83
SEC9YGR009C FLO11P08640 1367 aa3.62□□□□□ -1.83
SEC9YGR009C YHR125WP38831 101 aa3.62□□□□□ -1.83
SEC9YGR009C YNL208WP40159 199 aaKnown RBP3.62□□□□□ -1.83
SEC9YGR009C YMR244WQ04018 355 aa3.62□□□□□ -1.83
SEC9YGR009C YER078W-AQ3E7A2 54 aa3.62□□□□□ -1.83
SEC9YGR009C RTC6O14464 93 aa3.62□□□□□ -1.83
SEC9YGR009C YJR085CP47131 105 aaKnown RBP3.62□□□□□ -1.83
SEC9YGR009C CRH1P53301 507 aa3.62□□□□□ -1.83
SEC9YGR009C YCR095W-AQ3E787 52 aa3.62□□□□□ -1.83
SEC9YGR009C YGR035W-AQ45U48 73 aa3.62□□□□□ -1.83
SEC9YGR009C HMRA2P0CY13 119 aa3.61□□□□□ -1.83
SEC9YGR009C YEL067CP39978 195 aa3.61□□□□□ -1.83
SEC9YGR009C YMR030W-AQ3E760 96 aa3.61□□□□□ -1.83
SEC9YGR009C YJL197C-AP0C5P0 93 aa3.6□□□□□ -1.83
SEC9YGR009C MRPL38P35996 138 aaPredicted RBP3.6□□□□□ -1.83
SEC9YGR009C IRC21Q04772 201 aa3.6□□□□□ -1.83
SEC9YGR009C YOR192C-CQ3E736 78 aa3.6□□□□□ -1.83
SEC9YGR009C UBR2Q07963 1872 aa3.6□□□□□ -1.83
SEC9YGR009C CYR1P08678 2026 aaKnown RBP3.6□□□□□ -1.83
SEC9YGR009C HSP150P32478 413 aa3.6□□□□□ -1.83
SEC9YGR009C MRPL27P36526 146 aaPredicted RBP3.6□□□□□ -1.83
SEC9YGR009C VPS68Q12016 184 aa3.6□□□□□ -1.83
SEC9YGR009C YLR285C-AQ3E771 56 aa3.6□□□□□ -1.83
SEC9YGR009C YHR022CP38763 256 aa3.59□□□□□ -1.83
SEC9YGR009C YGR269WP40326 108 aa3.59□□□□□ -1.83
SEC9YGR009C SNA2P56508 79 aa3.59□□□□□ -1.83
SEC9YGR009C YKL018C-AQ3E7A7 99 aa3.59□□□□□ -1.83
SEC9YGR009C MIG3P39943 394 aa3.58□□□□□ -1.84
SEC9YGR009C REE1P40893 198 aa3.58□□□□□ -1.84
SEC9YGR009C PAU7P39545 55 aa3.58□□□□□ -1.84
SEC9YGR009C YPR096CO13587 100 aa3.57□□□□□ -1.84
SEC9YGR009C YHL037CP38733 133 aa3.57□□□□□ -1.84
SEC9YGR009C ECM19Q06011 112 aa3.57□□□□□ -1.84
SEC9YGR009C YLR111WQ12528 110 aa3.57□□□□□ -1.84
SEC9YGR009C EDC1P53080 175 aaPredicted RBP3.56□□□□□ -1.84
SEC9YGR009C YPR013CQ12145 317 aa3.56□□□□□ -1.84
SEC9YGR009C QCR8P08525 94 aa3.56□□□□□ -1.84
SEC9YGR009C HOT13P36078 116 aa3.56□□□□□ -1.84
SEC9YGR009C API2Q04413 109 aa3.56□□□□□ -1.84
SEC9YGR009C PRM7Q12459 698 aa3.56□□□□□ -1.84
SEC9YGR009C YPR053CQ6Q5F3 151 aa3.56□□□□□ -1.84
SEC9YGR009C YDR010CQ12426 110 aa3.55□□□□□ -1.84
SEC9YGR009C YIL156W-BQ2V2P4 73 aa3.55□□□□□ -1.84
SEC9YGR009C IGD1P43598 195 aa3.54□□□□□ -1.84
SEC9YGR009C MRX7P53869 86 aa3.54□□□□□ -1.84
SEC9YGR009C POR2P40478 281 aa3.54□□□□□ -1.84
SEC9YGR009C YDR182W-AQ3E796 67 aa3.54□□□□□ -1.84
SEC9YGR009C YNR077CP53758 84 aa3.53□□□□□ -1.84
SEC9YGR009C YMR321CQ04898 105 aa3.53□□□□□ -1.84
SEC9YGR009C COA3Q3E7B2 85 aa3.53□□□□□ -1.84
SEC9YGR009C YIL163CP40448 117 aa3.52□□□□□ -1.85
SEC9YGR009C COA2Q3E823 68 aa3.52□□□□□ -1.85
SEC9YGR009C YDR115WQ04598 105 aa3.52□□□□□ -1.85
SEC9YGR009C NOP10Q6Q547 58 aaPredicted RBP3.52□□□□□ -1.85
SEC9YGR009C NUP192P47054 1683 aa3.51□□□□□ -1.85
SEC9YGR009C YHR032W-AP0C5N6 59 aa3.51□□□□□ -1.85
SEC9YGR009C RPS30AP0CX33 63 aaKnown RBP3.51□□□□□ -1.85
SEC9YGR009C RPS30BP0CX34 63 aaKnown RBP3.51□□□□□ -1.85
SEC9YGR009C BSC4P53841 131 aa3.51□□□□□ -1.85
SEC9YGR009C YOR032W-AQ8TGS1 66 aa3.51□□□□□ -1.85
SEC9YGR009C YBR027CP38220 110 aa3.51□□□□□ -1.85
SEC9YGR009C CMC4Q3E7A9 73 aa3.51□□□□□ -1.85
SEC9YGR009C COX9P07255 59 aa3.5□□□□□ -1.85
SEC9YGR009C KRE9P39005 276 aa3.5□□□□□ -1.85
SEC9YGR009C FIT2Q08906 153 aa3.5□□□□□ -1.85
SEC9YGR009C YOR034C-AQ3E735 80 aa3.49□□□□□ -1.85
SEC9YGR009C STT4P37297 1900 aa3.48□□□□□ -1.85
SEC9YGR009C YLR236CA0A023PZG4 107 aa3.48□□□□□ -1.85
SEC9YGR009C FPR1P20081 114 aaKnown RBP3.47□□□□□ -1.85
SEC9YGR009C YMR254CQ04838 102 aa3.47□□□□□ -1.85
SEC9YGR009C YOL166W-AQ8TGJ1 51 aa3.47□□□□□ -1.85
SEC9YGR009C YDL022C-AP0C5L6 82 aa3.47□□□□□ -1.85
SEC9YGR009C YEL014CP39999 101 aa3.47□□□□□ -1.85
SEC9YGR009C DAD4P69851 72 aa3.47□□□□□ -1.85
SEC9YGR009C YCL048W-AQ2V2Q2 79 aa3.46□□□□□ -1.86
SEC9YGR009C YNL042W-BQ3E7Z2 85 aa3.46□□□□□ -1.86
SEC9YGR009C YFL067WP43537 175 aa3.45□□□□□ -1.86
SEC9YGR009C YMR007WQ03675 126 aa3.45□□□□□ -1.86
SEC9YGR009C YAL067W-AQ8TGK6 75 aa3.45□□□□□ -1.86
SEC9YGR009C YNL190WP53872 204 aa3.45□□□□□ -1.86
SEC9YGR009C YPR195CQ06594 109 aa3.44□□□□□ -1.86
SEC9YGR009C HKR1P41809 1802 aa3.43□□□□□ -1.86
SEC9YGR009C COX8P04039 78 aa3.43□□□□□ -1.86
SEC9YGR009C RPS11AP0CX47 156 aaKnown RBP3.42□□□□□ -1.86
SEC9YGR009C RPS11BP0CX48 156 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms