RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W CWP2P43497 92 aa5.27□□□□□ -1.57
SNF4YGL115W CAX4P53223 239 aa5.27□□□□□ -1.57
SNF4YGL115W COF1Q03048 143 aaKnown RBP5.27□□□□□ -1.57
SNF4YGL115W YPL038W-AQ3E7B4 63 aa5.27□□□□□ -1.57
SNF4YGL115W COX14P39103 70 aa5.26□□□□□ -1.57
SNF4YGL115W RPR2P40571 144 aa5.26□□□□□ -1.57
SNF4YGL115W UBC11P52492 156 aa5.26□□□□□ -1.57
SNF4YGL115W YGL088WP53151 121 aa5.26□□□□□ -1.57
SNF4YGL115W PMP3P87284 55 aa5.26□□□□□ -1.57
SNF4YGL115W TMC1Q08422 150 aaPredicted RBP5.26□□□□□ -1.57
SNF4YGL115W ARC15P40518 154 aaRIP-Chip data5.25□□□□□ -1.57not detected
SNF4YGL115W YFR035CP43608 114 aa5.25□□□□□ -1.57
SNF4YGL115W YBL112CQ3E7Y4 105 aa5.25□□□□□ -1.57
SNF4YGL115W YLR236CA0A023PZG4 107 aa5.24□□□□□ -1.57
SNF4YGL115W TIM10P87108 93 aa5.24□□□□□ -1.57
SNF4YGL115W YMR295CQ03559 197 aa5.24□□□□□ -1.57
SNF4YGL115W EMC6Q12431 108 aa5.24□□□□□ -1.57
SNF4YGL115W GCN1P33892 2672 aaKnown RBP5.24□□□□□ -1.57
SNF4YGL115W TOM6P33448 61 aa5.23□□□□□ -1.57
SNF4YGL115W KRE9P39005 276 aa5.23□□□□□ -1.57
SNF4YGL115W YIL059CP40520 121 aa5.23□□□□□ -1.57
SNF4YGL115W YLR361C-AQ3E795 98 aa5.23□□□□□ -1.57
SNF4YGL115W RPL2AP0CX45 254 aaKnown RBP5.22□□□□□ -1.57
SNF4YGL115W RPL2BP0CX46 254 aaKnown RBP5.22□□□□□ -1.57
SNF4YGL115W RPS11AP0CX47 156 aaKnown RBP5.22□□□□□ -1.57
SNF4YGL115W RPS11BP0CX48 156 aaKnown RBP5.22□□□□□ -1.57
SNF4YGL115W ECM12O13529 151 aa5.2□□□□□ -1.58
SNF4YGL115W YBR219CP38317 127 aa5.2□□□□□ -1.58
SNF4YGL115W VAM10Q08474 114 aa5.2□□□□□ -1.58
SNF4YGL115W YDR029WQ12111 104 aa5.2□□□□□ -1.58
SNF4YGL115W TAR1Q8TGM6 124 aa5.2□□□□□ -1.58
SNF4YGL115W YSY6P38374 65 aa5.19□□□□□ -1.58
SNF4YGL115W KNH1P50112 268 aa5.19□□□□□ -1.58
SNF4YGL115W ALG13P53178 202 aa5.19□□□□□ -1.58
SNF4YGL115W YJR107C-AP0CT86 78 aa5.18□□□□□ -1.58
SNF4YGL115W GAT4P40569 121 aa5.18□□□□□ -1.58
SNF4YGL115W YPS5P53057 165 aa5.18□□□□□ -1.58
SNF4YGL115W SRL1Q08673 210 aa5.18□□□□□ -1.58
SNF4YGL115W YLL006W-AQ3E814 58 aa5.18□□□□□ -1.58
SNF4YGL115W YMR122W-AQ3E842 84 aa5.18□□□□□ -1.58
SNF4YGL115W IRC21Q04772 201 aa5.17□□□□□ -1.58
SNF4YGL115W YOR034C-AQ3E735 80 aa5.17□□□□□ -1.58
SNF4YGL115W YBR126W-AQ8TGU7 68 aa5.17□□□□□ -1.58
SNF4YGL115W YHL018WP38744 120 aaPredicted RBP5.16□□□□□ -1.58
SNF4YGL115W URA2P07259 2214 aaKnown RBP5.16□□□□□ -1.58
SNF4YGL115W YLR415CO13578 112 aa5.15□□□□□ -1.59
SNF4YGL115W ICY1Q04329 127 aa5.15□□□□□ -1.59
SNF4YGL115W YDL241WQ07738 123 aa5.15□□□□□ -1.59
SNF4YGL115W Q0297Q9ZZV8 51 aa5.15□□□□□ -1.59
SNF4YGL115W YAL065CO13511 128 aa5.14□□□□□ -1.59
SNF4YGL115W RPL29P05747 59 aaPredicted RBP5.14□□□□□ -1.59
SNF4YGL115W ERI1P62651 68 aaKnown RBP5.14□□□□□ -1.59
SNF4YGL115W YGR240C-AQ3E786 66 aa5.14□□□□□ -1.59
SNF4YGL115W TOR2P32600 2474 aaKnown RBP5.13□□□□□ -1.59
SNF4YGL115W HAL1Q01766 294 aa5.13□□□□□ -1.59
SNF4YGL115W YER145C-AA0A023PYF4 145 aa5.12□□□□□ -1.59
SNF4YGL115W RSM19P53733 91 aaPredicted RBP5.12□□□□□ -1.59
SNF4YGL115W ATP18P81450 59 aa5.12□□□□□ -1.59
SNF4YGL115W YMR175W-AQ3E766 64 aa5.12□□□□□ -1.59
SNF4YGL115W YLR285C-AQ3E771 56 aa5.12□□□□□ -1.59
SNF4YGL115W YBR056W-AI2HB52 66 aa5.11□□□□□ -1.59
SNF4YGL115W YER039C-AP0CD97 72 aa5.11□□□□□ -1.59
SNF4YGL115W ERG28P40030 148 aa5.11□□□□□ -1.59
SNF4YGL115W YCR041WP37265 110 aa5.1□□□□□ -1.59
SNF4YGL115W YER187WP40102 141 aa5.1□□□□□ -1.59
SNF4YGL115W MPC3P53311 146 aa5.1□□□□□ -1.59
SNF4YGL115W RDS3Q06835 107 aaPredicted RBP5.1□□□□□ -1.59
SNF4YGL115W YLR156WP0CE96 114 aa5.08□□□□□ -1.6
SNF4YGL115W YLR159WP0CE97 114 aa5.08□□□□□ -1.6
SNF4YGL115W YLR161WP0CE98 114 aa5.08□□□□□ -1.6
SNF4YGL115W YHR212W-AP0CX91 67 aa5.08□□□□□ -1.6
SNF4YGL115W YDR246W-AQ3E763 66 aa5.08□□□□□ -1.6
SNF4YGL115W YCR050CP25630 102 aa5.07□□□□□ -1.6
SNF4YGL115W RPB9P27999 122 aa5.07□□□□□ -1.6
SNF4YGL115W YKL183C-AQ3E765 70 aa5.07□□□□□ -1.6
SNF4YGL115W YFR009W-AP0C5M9 85 aa5.06□□□□□ -1.6
SNF4YGL115W RPC10P40422 70 aa5.06□□□□□ -1.6
SNF4YGL115W MVB12P42939 101 aa5.06□□□□□ -1.6
SNF4YGL115W SBH1P52870 82 aa5.06□□□□□ -1.6
SNF4YGL115W EDC1P53080 175 aaPredicted RBP5.05□□□□□ -1.6
SNF4YGL115W CRC1Q12289 327 aa5.05□□□□□ -1.6
SNF4YGL115W TSC3Q3E790 80 aa5.05□□□□□ -1.6
SNF4YGL115W YPR010C-AA5Z2X5 72 aa5.03□□□□□ -1.6
SNF4YGL115W STF1P01098 86 aa5.03□□□□□ -1.6
SNF4YGL115W YBR144CP34215 104 aa5.03□□□□□ -1.6
SNF4YGL115W YDR274CP87283 123 aa5.03□□□□□ -1.6
SNF4YGL115W YLR281CQ05863 155 aa5.03□□□□□ -1.6
SNF4YGL115W ATP20Q12233 115 aa5.03□□□□□ -1.6
SNF4YGL115W YNL162W-AQ3E7A8 72 aa5.03□□□□□ -1.6
SNF4YGL115W RPL26AP05743 127 aaKnown RBP5.02□□□□□ -1.61
SNF4YGL115W UBC4P15731 148 aa5.02□□□□□ -1.61
SNF4YGL115W YFL019CP43576 117 aa5.02□□□□□ -1.61
SNF4YGL115W SFT1P43682 97 aa5.02□□□□□ -1.61
SNF4YGL115W RPL26BP53221 127 aaKnown RBP5.02□□□□□ -1.61
SNF4YGL115W YCR001WP25347 104 aa5.01□□□□□ -1.61
SNF4YGL115W YRA2P36036 203 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SNF4YGL115W AIM4P38305 123 aaPredicted RBP5.01□□□□□ -1.61
SNF4YGL115W RSM18P40033 138 aa5.01□□□□□ -1.61
SNF4YGL115W TDA2P40045 126 aa5.01□□□□□ -1.61
SNF4YGL115W SMD1Q02260 146 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms