RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C YNL190WP53872 204 aa7.53□□□□□ -1.2
SPC25YER018C ELC1Q03071 99 aa7.53□□□□□ -1.2
SPC25YER018C YLR363W-AQ3E747 85 aa7.53□□□□□ -1.2
SPC25YER018C ANB1P19211 157 aa7.51□□□□□ -1.21
SPC25YER018C YML079WQ03629 201 aa7.51□□□□□ -1.21
SPC25YER018C MID2P36027 376 aa7.5□□□□□ -1.21
SPC25YER018C YDL241WQ07738 123 aa7.5□□□□□ -1.21
SPC25YER018C SNA2P56508 79 aa7.49□□□□□ -1.21
SPC25YER018C CWC27Q02770 301 aa7.49□□□□□ -1.21
SPC25YER018C SMD1Q02260 146 aaPredicted RBP7.48□□□□□ -1.21
SPC25YER018C CWP2P43497 92 aa7.47□□□□□ -1.21
SPC25YER018C ABF2Q02486 183 aa7.46□□□□□ -1.22
SPC25YER018C AQY2P0CD90 149 aa7.45□□□□□ -1.22
SPC25YER018C YLL006W-AQ3E814 58 aa7.45□□□□□ -1.22
SPC25YER018C MRP10O75012 95 aa7.44□□□□□ -1.22
SPC25YER018C YDR034C-AP0C289 58 aa7.44□□□□□ -1.22
SPC25YER018C YDR029WQ12111 104 aa7.43□□□□□ -1.22
SPC25YER018C MBF1O14467 151 aaKnown RBP7.42□□□□□ -1.22
SPC25YER018C YER181CP40097 107 aa7.42□□□□□ -1.22
SPC25YER018C MVB12P42939 101 aa7.42□□□□□ -1.22
SPC25YER018C PAI3P01094 68 aa7.41□□□□□ -1.22
SPC25YER018C UBC11P52492 156 aa7.41□□□□□ -1.22
SPC25YER018C YIA6P40556 373 aa7.4□□□□□ -1.22
SPC25YER018C GAT4P40569 121 aa7.38□□□□□ -1.23
SPC25YER018C YFL019CP43576 117 aa7.38□□□□□ -1.23
SPC25YER018C HPA2Q06592 156 aa7.38□□□□□ -1.23
SPC25YER018C MHR1Q06630 226 aa7.38□□□□□ -1.23
SPC25YER018C YBL039W-BP0C268 59 aa7.37□□□□□ -1.23
SPC25YER018C EOS1P53938 366 aa7.37□□□□□ -1.23
SPC25YER018C LCL2Q08045 131 aa7.37□□□□□ -1.23
SPC25YER018C YPL229WQ99395 206 aa7.37□□□□□ -1.23
SPC25YER018C YLR296WQ05898 108 aa7.36□□□□□ -1.23
SPC25YER018C SMP1P38128 452 aa7.35□□□□□ -1.23
SPC25YER018C YHR130CP38834 111 aa7.35□□□□□ -1.23
SPC25YER018C UIP3P39547 235 aa7.35□□□□□ -1.23
SPC25YER018C RGM1Q00453 211 aa7.35□□□□□ -1.23
SPC25YER018C YOR020W-AQ3E824 90 aa7.35□□□□□ -1.23
SPC25YER018C ARO2P28777 376 aaKnown RBP7.34□□□□□ -1.23
SPC25YER018C NHP2P32495 156 aaPredicted RBP7.34□□□□□ -1.23
SPC25YER018C PEX22P39718 180 aa7.34□□□□□ -1.23
SPC25YER018C MET32Q12041 191 aa7.34□□□□□ -1.23
SPC25YER018C YKL023C-AQ2V2P3 75 aa7.34□□□□□ -1.23
SPC25YER018C YGL041C-BQ3E750 60 aa7.34□□□□□ -1.23
SPC25YER018C Q0032Q9ZZX7 96 aa7.34□□□□□ -1.23
SPC25YER018C MDN1Q12019 4910 aaKnown RBP7.34□□□□□ -1.23
SPC25YER018C CPR1P14832 162 aaKnown RBP7.33□□□□□ -1.24
SPC25YER018C POP7P38291 140 aa7.33□□□□□ -1.24
SPC25YER018C LSM6Q06406 86 aaKnown RBP7.33□□□□□ -1.24
SPC25YER018C STF1P01098 86 aa7.32□□□□□ -1.24
SPC25YER018C RPL29P05747 59 aaPredicted RBP7.32□□□□□ -1.24
SPC25YER018C AIM19P40502 157 aa7.32□□□□□ -1.24
SPC25YER018C YIL102C-AQ2V2P5 75 aa7.32□□□□□ -1.24
SPC25YER018C ECM12O13529 151 aa7.31□□□□□ -1.24
SPC25YER018C YPR170W-BP0C5R9 85 aa7.31□□□□□ -1.24
SPC25YER018C COX10P21592 462 aa7.31□□□□□ -1.24
SPC25YER018C KNH1P50112 268 aa7.31□□□□□ -1.24
SPC25YER018C IGD1P43598 195 aa7.3□□□□□ -1.24
SPC25YER018C IRC21Q04772 201 aa7.28□□□□□ -1.24
SPC25YER018C YNL198CP40166 100 aa7.27□□□□□ -1.25
SPC25YER018C YOR034C-AQ3E735 80 aa7.26□□□□□ -1.25
SPC25YER018C TMA7Q3E764 64 aaKnown RBP7.26□□□□□ -1.25
SPC25YER018C UBC4P15731 148 aa7.25□□□□□ -1.25
SPC25YER018C ICY1Q04329 127 aa7.25□□□□□ -1.25
SPC25YER018C RPL26AP05743 127 aaKnown RBP7.24□□□□□ -1.25
SPC25YER018C RPL26BP53221 127 aaKnown RBP7.24□□□□□ -1.25
SPC25YER018C MRPL24P36525 258 aaPredicted RBP7.23□□□□□ -1.25
SPC25YER018C HUR1P45820 110 aa7.23□□□□□ -1.25
SPC25YER018C ISU2Q12056 156 aa7.23□□□□□ -1.25
SPC25YER018C YNL162W-AQ3E7A8 72 aa7.23□□□□□ -1.25
SPC25YER018C HYP2P23301 157 aaKnown RBP7.22□□□□□ -1.25
SPC25YER018C YLR307C-AQ3E825 87 aa7.22□□□□□ -1.25
SPC25YER018C LCL1Q02786 101 aa7.19□□□□□ -1.26
SPC25YER018C YGL193CP53097 103 aa7.18□□□□□ -1.26
SPC25YER018C GIS2P53849 153 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
SPC25YER018C YPL257WQ08974 193 aa7.15□□□□□ -1.26
SPC25YER018C YBR230W-AQ3E762 66 aa7.15□□□□□ -1.26
SPC25YER018C YJL127C-BQ3E828 52 aa7.15□□□□□ -1.26
SPC25YER018C YLR236CA0A023PZG4 107 aa7.14□□□□□ -1.27
SPC25YER018C YNL042W-BQ3E7Z2 85 aa7.14□□□□□ -1.27
SPC25YER018C FYV5P25585 152 aa7.13□□□□□ -1.27
SPC25YER018C MPC3P53311 146 aa7.13□□□□□ -1.27
SPC25YER018C MMS2P53152 137 aa7.12□□□□□ -1.27
SPC25YER018C MSA2P36157 363 aa7.11□□□□□ -1.27
SPC25YER018C DDR2P89113 61 aa7.11□□□□□ -1.27
SPC25YER018C YER039C-AP0CD97 72 aa7.1□□□□□ -1.27
SPC25YER018C DSE2P38844 325 aa7.1□□□□□ -1.27
SPC25YER018C YLR156WP0CE96 114 aa7.09□□□□□ -1.27
SPC25YER018C YLR159WP0CE97 114 aa7.09□□□□□ -1.27
SPC25YER018C YLR161WP0CE98 114 aa7.09□□□□□ -1.27
SPC25YER018C SPT4P32914 102 aaPredicted RBP7.08□□□□□ -1.28
SPC25YER018C DUT1P33317 147 aa7.08□□□□□ -1.28
SPC25YER018C BET1P22804 142 aa7.05□□□□□ -1.28
SPC25YER018C YJR107C-AP0CT86 78 aa7.04□□□□□ -1.28
SPC25YER018C BSC4P53841 131 aa7.04□□□□□ -1.28
SPC25YER018C YHR007C-AQ07074 71 aa7.02□□□□□ -1.29
SPC25YER018C YBL112CQ3E7Y4 105 aa7.02□□□□□ -1.29
SPC25YER018C SFT1P43682 97 aa7.01□□□□□ -1.29
SPC25YER018C YLR415CO13578 112 aa7□□□□□ -1.29
SPC25YER018C DDR48P18899 430 aaKnown RBP7□□□□□ -1.29
SPC25YER018C TSC3Q3E790 80 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms