RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W YLL066W-BQ8TGJ7 56 aa2.35□□□□□ -2.03
RRP17YDR412W YLR236CA0A023PZG4 107 aa2.34□□□□□ -2.03
RRP17YDR412W RTC6O14464 93 aa2.34□□□□□ -2.03
RRP17YDR412W PAU1P0CE88 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU14P0CE89 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU6P0CE90 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU18P0CE91 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU8P0CE92 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU11P0CE93 120 aa2.34□□□□□ -2.03
RRP17YDR412W PAU13P38725 120 aa2.34□□□□□ -2.03
RRP17YDR412W BRP1P53194 125 aa2.34□□□□□ -2.03
RRP17YDR412W PAU10Q03050 120 aa2.34□□□□□ -2.03
RRP17YDR412W YLR042CQ07990 161 aa2.34□□□□□ -2.03
RRP17YDR412W PAU20Q08322 120 aa2.34□□□□□ -2.03
RRP17YDR412W YOR105WQ08504 108 aa2.34□□□□□ -2.03
RRP17YDR412W PAU9Q3E770 120 aa2.34□□□□□ -2.03
RRP17YDR412W YLR342W-AQ3E810 57 aa2.34□□□□□ -2.03
RRP17YDR412W CYB5P40312 120 aa2.33□□□□□ -2.04
RRP17YDR412W DAD3P69850 94 aa2.33□□□□□ -2.04
RRP17YDR412W UPS3Q04006 179 aa2.33□□□□□ -2.04
RRP17YDR412W COX19Q3E731 98 aa2.33□□□□□ -2.04
RRP17YDR412W RPS22AP0C0W1 130 aaKnown RBP2.32□□□□□ -2.04
RRP17YDR412W YDR034C-AP0C289 58 aa2.32□□□□□ -2.04
RRP17YDR412W PHS1P40857 217 aa2.32□□□□□ -2.04
RRP17YDR412W ELC1Q03071 99 aa2.32□□□□□ -2.04
RRP17YDR412W PCC1Q3E833 88 aa2.32□□□□□ -2.04
RRP17YDR412W YCL001W-BQ96VH2 84 aa2.32□□□□□ -2.04
RRP17YDR412W RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
RRP17YDR412W YCR050CP25630 102 aa2.31□□□□□ -2.04
RRP17YDR412W YBR209WP38311 105 aa2.31□□□□□ -2.04
RRP17YDR412W SNN1P48232 102 aa2.31□□□□□ -2.04
RRP17YDR412W PMP3P87284 55 aa2.31□□□□□ -2.04
RRP17YDR412W CUE4Q04201 117 aaPredicted RBP2.31□□□□□ -2.04
RRP17YDR412W YER039C-AP0CD97 72 aa2.3□□□□□ -2.04
RRP17YDR412W RPB11P38902 120 aa2.3□□□□□ -2.04
RRP17YDR412W YEL067CP39978 195 aa2.3□□□□□ -2.04
RRP17YDR412W SPG1P50088 95 aa2.3□□□□□ -2.04
RRP17YDR412W THG1P53215 237 aaKnown RBP2.3□□□□□ -2.04
RRP17YDR412W ATP19P81451 68 aa2.3□□□□□ -2.04
RRP17YDR412W RGM1Q00453 211 aa2.3□□□□□ -2.04
RRP17YDR412W YDL241WQ07738 123 aa2.3□□□□□ -2.04
RRP17YDR412W FYV7Q12247 151 aa2.3□□□□□ -2.04
RRP17YDR412W MRPL31P14063 131 aaPredicted RBP2.29□□□□□ -2.04
RRP17YDR412W NSE4P43124 402 aa2.29□□□□□ -2.04
RRP17YDR412W SAE3P89114 91 aa2.29□□□□□ -2.04
RRP17YDR412W SCS22Q6Q595 175 aa2.29□□□□□ -2.04
RRP17YDR412W INO4P13902 151 aa2.28□□□□□ -2.04
RRP17YDR412W SEC11P15367 167 aa2.28□□□□□ -2.04
RRP17YDR412W UBC5P15732 148 aa2.28□□□□□ -2.04
RRP17YDR412W GPI19Q04082 140 aa2.28□□□□□ -2.04
RRP17YDR412W YMR122W-AQ3E842 84 aa2.28□□□□□ -2.04
RRP17YDR412W SEC59P20048 519 aa2.27□□□□□ -2.05
RRP17YDR412W YGL010WP25338 174 aa2.27□□□□□ -2.05
RRP17YDR412W YHL042WP38729 150 aa2.27□□□□□ -2.05
RRP17YDR412W YHL018WP38744 120 aaPredicted RBP2.27□□□□□ -2.05
RRP17YDR412W YAL064WP39711 94 aa2.27□□□□□ -2.05
RRP17YDR412W DCV1P43595 202 aa2.27□□□□□ -2.05
RRP17YDR412W KNH1P50112 268 aa2.27□□□□□ -2.05
RRP17YDR412W POP3P53833 195 aaPredicted RBP2.27□□□□□ -2.05
RRP17YDR412W ERI1P62651 68 aaKnown RBP2.27□□□□□ -2.05
RRP17YDR412W CYT2Q00873 224 aa2.27□□□□□ -2.05
RRP17YDR412W KTI11Q3E840 82 aa2.27□□□□□ -2.05
RRP17YDR412W YPR010C-AA5Z2X5 72 aa2.26□□□□□ -2.05
RRP17YDR412W COX8P04039 78 aa2.26□□□□□ -2.05
RRP17YDR412W YJL197C-AP0C5P0 93 aa2.26□□□□□ -2.05
RRP17YDR412W YBR013CP38215 129 aa2.26□□□□□ -2.05
RRP17YDR412W LSM8P47093 109 aaKnown RBP2.26□□□□□ -2.05
RRP17YDR412W YML079WQ03629 201 aa2.26□□□□□ -2.05
RRP17YDR412W YNR034W-AQ3E841 98 aa2.26□□□□□ -2.05
RRP17YDR412W YGL230CP53074 147 aa2.25□□□□□ -2.05
RRP17YDR412W SNA2P56508 79 aa2.25□□□□□ -2.05
RRP17YDR412W YDR029WQ12111 104 aa2.25□□□□□ -2.05
RRP17YDR412W EMC6Q12431 108 aa2.25□□□□□ -2.05
RRP17YDR412W VMA9Q3E7B6 73 aa2.25□□□□□ -2.05
RRP17YDR412W SRB6P32570 121 aa2.24□□□□□ -2.05
RRP17YDR412W PAU7P39545 55 aa2.24□□□□□ -2.05
RRP17YDR412W PAU5P43575 122 aa2.24□□□□□ -2.05
RRP17YDR412W CWC27Q02770 301 aa2.24□□□□□ -2.05
RRP17YDR412W LCL1Q02786 101 aa2.24□□□□□ -2.05
RRP17YDR412W SOM1Q05676 74 aa2.24□□□□□ -2.05
RRP17YDR412W YOR376W-AQ3E805 51 aa2.24□□□□□ -2.05
RRP17YDR412W YLR307C-AQ3E825 87 aa2.24□□□□□ -2.05
RRP17YDR412W HMRA1P0CY11 126 aa2.23□□□□□ -2.05
RRP17YDR412W QCR10P37299 77 aa2.23□□□□□ -2.05
RRP17YDR412W HSP10P38910 106 aa2.23□□□□□ -2.05
RRP17YDR412W YAR029WP39549 74 aa2.23□□□□□ -2.05
RRP17YDR412W PRE1P22141 198 aaKnown RBP2.21□□□□□ -2.06
RRP17YDR412W FYV5P25585 152 aa2.21□□□□□ -2.06
RRP17YDR412W RPC10P40422 70 aa2.21□□□□□ -2.06
RRP17YDR412W YDL157CQ12082 118 aa2.21□□□□□ -2.06
RRP17YDR412W ENV10Q99382 181 aa2.21□□□□□ -2.06
RRP17YDR412W YBR219CP38317 127 aa2.2□□□□□ -2.06
RRP17YDR412W YEL008WP40001 126 aa2.2□□□□□ -2.06
RRP17YDR412W VMA21P41806 77 aa2.2□□□□□ -2.06
RRP17YDR412W YIL014C-AQ02598 104 aa2.2□□□□□ -2.06
RRP17YDR412W YLR194CQ05777 254 aa2.2□□□□□ -2.06
RRP17YDR412W YDR010CQ12426 110 aa2.2□□□□□ -2.06
RRP17YDR412W YOR008C-AQ3E7B9 74 aa2.2□□□□□ -2.06
RRP17YDR412W PFY1P07274 126 aa2.19□□□□□ -2.06
RRP17YDR412W ATG8P38182 117 aaRIP-Chip data2.19□□□□□ -2.06not detected
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms