RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C RPL43AP0CX25 92 aaKnown RBP1.69□□□□□ -2.14
SSD1YDR293C RPL43BP0CX26 92 aa1.69□□□□□ -2.14
SSD1YDR293C ICY1Q04329 127 aa1.69□□□□□ -2.14
SSD1YDR293C CRC1Q12289 327 aa1.69□□□□□ -2.14
SSD1YDR293C EMC6Q12431 108 aa1.69□□□□□ -2.14
SSD1YDR293C BLM10P43583 2143 aa1.69□□□□□ -2.14
SSD1YDR293C YOR304C-AO14468 76 aa1.69□□□□□ -2.14
SSD1YDR293C MIG3P39943 394 aa1.69□□□□□ -2.14
SSD1YDR293C YNL198CP40166 100 aa1.69□□□□□ -2.14
SSD1YDR293C SKI6P46948 246 aaPredicted RBP1.69□□□□□ -2.14
SSD1YDR293C OST2P46964 130 aa1.69□□□□□ -2.14
SSD1YDR293C HAL1Q01766 294 aa1.69□□□□□ -2.14
SSD1YDR293C RPL16AP26784 199 aaKnown RBP1.68□□□□□ -2.14
SSD1YDR293C MSA2P36157 363 aa1.68□□□□□ -2.14
SSD1YDR293C YBR090CP38253 122 aa1.68□□□□□ -2.14
SSD1YDR293C YSY6P38374 65 aa1.68□□□□□ -2.14
SSD1YDR293C SVP26P38869 228 aa1.68□□□□□ -2.14
SSD1YDR293C YMR320WQ04897 101 aa1.68□□□□□ -2.14
SSD1YDR293C YOR011W-AQ3E807 68 aa1.68□□□□□ -2.14
SSD1YDR293C YLR236CA0A023PZG4 107 aa1.68□□□□□ -2.14
SSD1YDR293C YRA2P36036 203 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SSD1YDR293C YEL008WP40001 126 aa1.68□□□□□ -2.14
SSD1YDR293C WWM1P43582 211 aaKnown RBP1.68□□□□□ -2.14
SSD1YDR293C YEL067CP39978 195 aa1.67□□□□□ -2.14
SSD1YDR293C YLR281CQ05863 155 aa1.67□□□□□ -2.14
SSD1YDR293C TMC1Q08422 150 aaPredicted RBP1.67□□□□□ -2.14
SSD1YDR293C YIR021W-AQ3E739 70 aa1.67□□□□□ -2.14
SSD1YDR293C RTC6O14464 93 aa1.67□□□□□ -2.14
SSD1YDR293C HOT13P36078 116 aa1.67□□□□□ -2.14
SSD1YDR293C KRE9P39005 276 aa1.67□□□□□ -2.14
SSD1YDR293C YER085CP40058 173 aa1.67□□□□□ -2.14
SSD1YDR293C MRPS12P53732 153 aa1.67□□□□□ -2.14
SSD1YDR293C ATP15P21306 62 aa1.67□□□□□ -2.14
SSD1YDR293C SNU13P39990 126 aaKnown RBP1.67□□□□□ -2.14
SSD1YDR293C YML122CQ03207 126 aa1.67□□□□□ -2.14
SSD1YDR293C PRM7Q12459 698 aa1.67□□□□□ -2.14
SSD1YDR293C ACC1Q00955 2233 aaKnown RBP1.66□□□□□ -2.14
SSD1YDR293C YHR212W-AP0CX91 67 aa1.66□□□□□ -2.14
SSD1YDR293C YNR077CP53758 84 aa1.66□□□□□ -2.14
SSD1YDR293C RPL33AP05744 107 aaKnown RBP1.66□□□□□ -2.14
SSD1YDR293C INO4P13902 151 aa1.66□□□□□ -2.14
SSD1YDR293C RPL33BP41056 107 aaKnown RBP1.66□□□□□ -2.14
SSD1YDR293C TOM6P33448 61 aa1.65□□□□□ -2.14
SSD1YDR293C YIL059CP40520 121 aa1.65□□□□□ -2.14
SSD1YDR293C AQY2P0CD90 149 aa1.65□□□□□ -2.15
SSD1YDR293C YJR107C-AP0CT86 78 aa1.65□□□□□ -2.15
SSD1YDR293C UBC4P15731 148 aa1.65□□□□□ -2.15
SSD1YDR293C YLL006W-AQ3E814 58 aa1.65□□□□□ -2.15
SSD1YDR293C MVB12P42939 101 aa1.65□□□□□ -2.15
SSD1YDR293C YDL022C-AP0C5L6 82 aa1.64□□□□□ -2.15
SSD1YDR293C YCR050CP25630 102 aa1.64□□□□□ -2.15
SSD1YDR293C YDR381C-AQ3E6R5 114 aa1.64□□□□□ -2.15
SSD1YDR293C HFA1P32874 2273 aa1.64□□□□□ -2.15
SSD1YDR293C YAL065CO13511 128 aa1.64□□□□□ -2.15
SSD1YDR293C RPL28P02406 149 aaKnown RBP1.64□□□□□ -2.15
SSD1YDR293C SPT4P32914 102 aaPredicted RBP1.64□□□□□ -2.15
SSD1YDR293C PEX22P39718 180 aa1.64□□□□□ -2.15
SSD1YDR293C CAX4P53223 239 aa1.64□□□□□ -2.15
SSD1YDR293C ATP18P81450 59 aa1.64□□□□□ -2.15
SSD1YDR293C IRC21Q04772 201 aa1.64□□□□□ -2.15
SSD1YDR293C YPR013CQ12145 317 aa1.64□□□□□ -2.15
SSD1YDR293C YDR182W-AQ3E796 67 aa1.64□□□□□ -2.15
SSD1YDR293C YPL229WQ99395 206 aa1.64□□□□□ -2.15
SSD1YDR293C YMR295CQ03559 197 aa1.64□□□□□ -2.15
SSD1YDR293C FYV5P25585 152 aa1.63□□□□□ -2.15
SSD1YDR293C MIG1P27705 504 aa1.63□□□□□ -2.15
SSD1YDR293C YBR209WP38311 105 aa1.63□□□□□ -2.15
SSD1YDR293C TDA2P40045 126 aa1.63□□□□□ -2.15
SSD1YDR293C YFL067WP43537 175 aa1.63□□□□□ -2.15
SSD1YDR293C COF1Q03048 143 aaKnown RBP1.63□□□□□ -2.15
SSD1YDR293C PBA1Q05778 276 aa1.63□□□□□ -2.15
SSD1YDR293C YNL042W-BQ3E7Z2 85 aa1.63□□□□□ -2.15
SSD1YDR293C PBI2P0CT04 75 aaKnown RBP1.63□□□□□ -2.15
SSD1YDR293C YCL042WP25572 119 aa1.63□□□□□ -2.15
SSD1YDR293C YFL065CP43539 102 aa1.63□□□□□ -2.15
SSD1YDR293C YPR203WQ08994 102 aa1.63□□□□□ -2.15
SSD1YDR293C YAL063C-AQ3E791 96 aa1.63□□□□□ -2.15
SSD1YDR293C YPL038W-AQ3E7B4 63 aa1.63□□□□□ -2.15
SSD1YDR293C ECM12O13529 151 aa1.63□□□□□ -2.15
SSD1YDR293C KTI11Q3E840 82 aa1.63□□□□□ -2.15
SSD1YDR293C TRA1P38811 3744 aa1.63□□□□□ -2.15
SSD1YDR293C GAT4P40569 121 aa1.62□□□□□ -2.15
SSD1YDR293C YOR314WQ12506 109 aa1.62□□□□□ -2.15
SSD1YDR293C YHR139C-AO13536 103 aa1.62□□□□□ -2.15
SSD1YDR293C CUP1-1P0CX80 61 aa1.62□□□□□ -2.15
SSD1YDR293C CUP1-2P0CX81 61 aa1.62□□□□□ -2.15
SSD1YDR293C COX23P38824 151 aa1.62□□□□□ -2.15
SSD1YDR293C EDC2P40023 145 aaPredicted RBP1.62□□□□□ -2.15
SSD1YDR293C HUA1P40325 198 aa1.62□□□□□ -2.15
SSD1YDR293C SPG1P50088 95 aa1.62□□□□□ -2.15
SSD1YDR293C IRA1P18963 3092 aa1.62□□□□□ -2.15
SSD1YDR293C SMD1Q02260 146 aaPredicted RBP1.61□□□□□ -2.15
SSD1YDR293C ATP20Q12233 115 aa1.61□□□□□ -2.15
SSD1YDR293C TAR1Q8TGM6 124 aa1.61□□□□□ -2.15
SSD1YDR293C YGR121W-AQ3E816 71 aa1.61□□□□□ -2.15
SSD1YDR293C SEC16P48415 2195 aaKnown RBP1.61□□□□□ -2.15
SSD1YDR293C Q0032Q9ZZX7 96 aa1.61□□□□□ -2.15
SSD1YDR293C SMP1P38128 452 aa1.6□□□□□ -2.15
SSD1YDR293C YPR117WQ06116 2489 aa1.6□□□□□ -2.15
SSD1YDR293C ECM19Q06011 112 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms