RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C ATX1P38636 73 aa2.9□□□□□ -1.95
RPO21YDL140C POP3P53833 195 aaPredicted RBP2.9□□□□□ -1.95
RPO21YDL140C YOL160WQ08321 113 aa2.9□□□□□ -1.95
RPO21YDL140C YDL157CQ12082 118 aa2.9□□□□□ -1.95
RPO21YDL140C YPR013CQ12145 317 aa2.9□□□□□ -1.95
RPO21YDL140C SPT4P32914 102 aaPredicted RBP2.89□□□□□ -1.95
RPO21YDL140C YGL194C-AQ2V2P6 80 aa2.89□□□□□ -1.95
RPO21YDL140C GLE2P40066 365 aa2.89□□□□□ -1.95
RPO21YDL140C VMA21P41806 77 aa2.89□□□□□ -1.95
RPO21YDL140C IRC21Q04772 201 aa2.89□□□□□ -1.95
RPO21YDL140C NAT5Q08689 176 aa2.89□□□□□ -1.95
RPO21YDL140C CDC39P25655 2108 aaKnown RBP2.89□□□□□ -1.95
RPO21YDL140C YCR022CP25620 114 aa2.89□□□□□ -1.95
RPO21YDL140C SEC16P48415 2195 aaKnown RBP2.89□□□□□ -1.95
RPO21YDL140C YKL183C-AQ3E765 70 aa2.88□□□□□ -1.95
RPO21YDL140C FKS1P38631 1876 aaKnown RBP2.88□□□□□ -1.95
RPO21YDL140C SPS18P32572 300 aa2.88□□□□□ -1.95
RPO21YDL140C YNL208WP40159 199 aaKnown RBP2.88□□□□□ -1.95
RPO21YDL140C YCR085WP25650 117 aa2.88□□□□□ -1.95
RPO21YDL140C RPC10P40422 70 aa2.87□□□□□ -1.95
RPO21YDL140C DSK2P48510 373 aa2.87□□□□□ -1.95
RPO21YDL140C HPA2Q06592 156 aa2.87□□□□□ -1.95
RPO21YDL140C YIL156W-BQ2V2P4 73 aa2.87□□□□□ -1.95
RPO21YDL140C YGR039WP53225 103 aa2.87□□□□□ -1.95
RPO21YDL140C RIF1P29539 1916 aa2.87□□□□□ -1.95
RPO21YDL140C RPL28P02406 149 aaKnown RBP2.86□□□□□ -1.95
RPO21YDL140C YKL044WP36092 106 aa2.86□□□□□ -1.95
RPO21YDL140C RPL36BO14455 100 aaKnown RBP2.86□□□□□ -1.95
RPO21YDL140C SNA4Q07549 140 aa2.86□□□□□ -1.95
RPO21YDL140C PAU21P0CE86 164 aa2.86□□□□□ -1.95
RPO21YDL140C PAU22P0CE87 164 aa2.86□□□□□ -1.95
RPO21YDL140C SMP1P38128 452 aa2.86□□□□□ -1.95
RPO21YDL140C POP7P38291 140 aa2.86□□□□□ -1.95
RPO21YDL140C MBF1O14467 151 aaKnown RBP2.85□□□□□ -1.95
RPO21YDL140C PFY1P07274 126 aa2.85□□□□□ -1.95
RPO21YDL140C IGD1P43598 195 aa2.85□□□□□ -1.95
RPO21YDL140C OLI1P61829 76 aa2.85□□□□□ -1.95
RPO21YDL140C ICS3P47034 131 aa2.85□□□□□ -1.95
RPO21YDL140C YBR200W-AQ3E755 54 aa2.84□□□□□ -1.96
RPO21YDL140C EDC2P40023 145 aaPredicted RBP2.84□□□□□ -1.96
RPO21YDL140C ATP15P21306 62 aa2.83□□□□□ -1.96
RPO21YDL140C YLL006W-AQ3E814 58 aa2.83□□□□□ -1.96
RPO21YDL140C YLR307C-AQ3E825 87 aa2.83□□□□□ -1.96
RPO21YDL140C YCR025CP25352 136 aa2.82□□□□□ -1.96
RPO21YDL140C RDS3Q06835 107 aaPredicted RBP2.82□□□□□ -1.96
RPO21YDL140C NUP42P49686 430 aaKnown RBP2.82□□□□□ -1.96
RPO21YDL140C YDR010CQ12426 110 aa2.82□□□□□ -1.96
RPO21YDL140C YGR121W-AQ3E816 71 aa2.82□□□□□ -1.96
RPO21YDL140C RPL33AP05744 107 aaKnown RBP2.82□□□□□ -1.96
RPO21YDL140C RPL33BP41056 107 aaKnown RBP2.82□□□□□ -1.96
RPO21YDL140C YGR018CP53211 109 aa2.82□□□□□ -1.96
RPO21YDL140C BSC4P53841 131 aa2.82□□□□□ -1.96
RPO21YDL140C AGA1P32323 725 aa2.81□□□□□ -1.96
RPO21YDL140C RRT15Q3E811 62 aa2.81□□□□□ -1.96
RPO21YDL140C YBR298C-AQ8TGK4 73 aa2.81□□□□□ -1.96
RPO21YDL140C OST5Q92316 86 aa2.81□□□□□ -1.96
RPO21YDL140C YHR213WP0CI67 198 aa2.81□□□□□ -1.96
RPO21YDL140C LCL2Q08045 131 aa2.81□□□□□ -1.96
RPO21YDL140C TOS6P48560 102 aa2.8□□□□□ -1.96
RPO21YDL140C YJR085CP47131 105 aaKnown RBP2.8□□□□□ -1.96
RPO21YDL140C ECM19Q06011 112 aa2.8□□□□□ -1.96
RPO21YDL140C COX19Q3E731 98 aa2.8□□□□□ -1.96
RPO21YDL140C HKR1P41809 1802 aa2.8□□□□□ -1.96
RPO21YDL140C QRI5P32344 111 aa2.8□□□□□ -1.96
RPO21YDL140C YMR103CQ04436 120 aa2.8□□□□□ -1.96
RPO21YDL140C YOL097W-AQ3E7Y9 61 aa2.8□□□□□ -1.96
RPO21YDL140C CPR1P14832 162 aaKnown RBP2.8□□□□□ -1.96
RPO21YDL140C YJR107C-AP0CT86 78 aa2.79□□□□□ -1.96
RPO21YDL140C YHR007C-AQ07074 71 aa2.79□□□□□ -1.96
RPO21YDL140C MRPL44P19956 98 aa2.79□□□□□ -1.96
RPO21YDL140C KRE9P39005 276 aa2.79□□□□□ -1.96
RPO21YDL140C YEL008WP40001 126 aa2.79□□□□□ -1.96
RPO21YDL140C MPC3P53311 146 aa2.79□□□□□ -1.96
RPO21YDL140C ATP20Q12233 115 aa2.78□□□□□ -1.96
RPO21YDL140C YOR072W-BQ3E832 53 aa2.78□□□□□ -1.96
RPO21YDL140C YEL067CP39978 195 aa2.78□□□□□ -1.96
RPO21YDL140C LSM6Q06406 86 aaKnown RBP2.78□□□□□ -1.96
RPO21YDL140C TAR1Q8TGM6 124 aa2.78□□□□□ -1.96
RPO21YDL140C DUT1P33317 147 aa2.78□□□□□ -1.96
RPO21YDL140C YOL118CQ08259 102 aa2.78□□□□□ -1.96
RPO21YDL140C YJL133C-AQ3E7A3 74 aa2.78□□□□□ -1.96
RPO21YDL140C YBL081WP38180 368 aaKnown RBP2.78□□□□□ -1.96
RPO21YDL140C FAS1P07149 2051 aaKnown RBP2.78□□□□□ -1.96
RPO21YDL140C MSA2P36157 363 aa2.77□□□□□ -1.97
RPO21YDL140C YNL190WP53872 204 aa2.77□□□□□ -1.97
RPO21YDL140C CYT2Q00873 224 aa2.77□□□□□ -1.97
RPO21YDL140C HUB1Q6Q546 73 aa2.77□□□□□ -1.97
RPO21YDL140C FZF1P32805 299 aa2.77□□□□□ -1.97
RPO21YDL140C PBI2P0CT04 75 aaKnown RBP2.77□□□□□ -1.97
RPO21YDL140C YGR269WP40326 108 aa2.77□□□□□ -1.97
RPO21YDL140C CCH1P50077 2039 aa2.76□□□□□ -1.97
RPO21YDL140C YOL085CQ99345 113 aa2.76□□□□□ -1.97
RPO21YDL140C UBC5P15732 148 aa2.76□□□□□ -1.97
RPO21YDL140C HUA1P40325 198 aa2.76□□□□□ -1.97
RPO21YDL140C ICY1Q04329 127 aa2.76□□□□□ -1.97
RPO21YDL140C FMP16Q12497 93 aa2.76□□□□□ -1.97
RPO21YDL140C YBR201C-AQ2V2Q3 67 aa2.76□□□□□ -1.97
RPO21YDL140C CUE4Q04201 117 aaPredicted RBP2.75□□□□□ -1.97
RPO21YDL140C COX8P04039 78 aa2.75□□□□□ -1.97
RPO21YDL140C YLR296WQ05898 108 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms