RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C UBC4P15731 148 aa1.14□□□□□ -2.23
PRP6YBR055C BUD23P25627 275 aaPredicted RBP1.14□□□□□ -2.23
PRP6YBR055C PAU24P38155 120 aa1.14□□□□□ -2.23
PRP6YBR055C SNN1P48232 102 aa1.14□□□□□ -2.23
PRP6YBR055C YMR090WQ04304 227 aaKnown RBP1.14□□□□□ -2.23
PRP6YBR055C YOS1Q3E834 85 aa1.14□□□□□ -2.23
PRP6YBR055C MIC10Q96VH5 97 aa1.14□□□□□ -2.23
PRP6YBR055C YIL163CP40448 117 aa1.14□□□□□ -2.23
PRP6YBR055C SEN1Q00416 2231 aaKnown RBP1.13□□□□□ -2.23
PRP6YBR055C YCR001WP25347 104 aa1.13□□□□□ -2.23
PRP6YBR055C VMA21P41806 77 aa1.13□□□□□ -2.23
PRP6YBR055C ZEO1Q08245 113 aa1.13□□□□□ -2.23
PRP6YBR055C CCW12Q12127 133 aa1.13□□□□□ -2.23
PRP6YBR055C RPL22AP05749 121 aaKnown RBP1.13□□□□□ -2.23
PRP6YBR055C YOR072WQ08486 104 aa1.13□□□□□ -2.23
PRP6YBR055C BEM2P39960 2167 aaKnown RBP1.12□□□□□ -2.23
PRP6YBR055C YOL013W-AP0C272 63 aaPredicted RBP1.12□□□□□ -2.23
PRP6YBR055C PAU19P0CE85 124 aa1.12□□□□□ -2.23
PRP6YBR055C PAU3P25610 124 aa1.12□□□□□ -2.23
PRP6YBR055C HUA1P40325 198 aa1.12□□□□□ -2.23
PRP6YBR055C YIL102CP40488 101 aa1.12□□□□□ -2.23
PRP6YBR055C MGR2Q02889 113 aa1.11□□□□□ -2.23
PRP6YBR055C GCN1P33892 2672 aaKnown RBP1.11□□□□□ -2.23
PRP6YBR055C YMR007WQ03675 126 aa1.11□□□□□ -2.23
PRP6YBR055C YBR013CP38215 129 aa1.1□□□□□ -2.23
PRP6YBR055C ICS3P47034 131 aa1.1□□□□□ -2.23
PRP6YBR055C YLR363W-AQ3E747 85 aa1.1□□□□□ -2.23
PRP6YBR055C YLR285C-AQ3E771 56 aa1.1□□□□□ -2.23
PRP6YBR055C KSH1Q8TGJ3 72 aa1.1□□□□□ -2.23
PRP6YBR055C RPS22AP0C0W1 130 aaKnown RBP1.1□□□□□ -2.23
PRP6YBR055C CYB5P40312 120 aa1.1□□□□□ -2.23
PRP6YBR055C MIC27P50945 234 aa1.1□□□□□ -2.23
PRP6YBR055C MIX14Q04341 121 aa1.1□□□□□ -2.23
PRP6YBR055C FIT3Q08907 204 aa1.1□□□□□ -2.23
PRP6YBR055C RPS22BQ3E7Y3 130 aaKnown RBP1.1□□□□□ -2.23
PRP6YBR055C SLH1P53327 1967 aaKnown RBP1.1□□□□□ -2.23
PRP6YBR055C DYN1P36022 4092 aa1.1□□□□□ -2.23
PRP6YBR055C PAU16P35994 123 aa1.09□□□□□ -2.23
PRP6YBR055C PAU15P40585 124 aa1.09□□□□□ -2.23
PRP6YBR055C HMRA2P0CY13 119 aa1.09□□□□□ -2.24
PRP6YBR055C COA6Q3E846 104 aa1.09□□□□□ -2.24
PRP6YBR055C IRA1P18963 3092 aa1.08□□□□□ -2.24
PRP6YBR055C FMP27Q06179 2628 aa1.08□□□□□ -2.24
PRP6YBR055C ENV10Q99382 181 aa1.08□□□□□ -2.24
PRP6YBR055C SEC16P48415 2195 aaKnown RBP1.08□□□□□ -2.24
PRP6YBR055C YCL048W-AQ2V2Q2 79 aa1.08□□□□□ -2.24
PRP6YBR055C YGL041C-BQ3E750 60 aa1.08□□□□□ -2.24
PRP6YBR055C YGR240C-AQ3E786 66 aa1.08□□□□□ -2.24
PRP6YBR055C VPS55P47111 140 aa1.07□□□□□ -2.24
PRP6YBR055C MRPL31P14063 131 aaPredicted RBP1.07□□□□□ -2.24
PRP6YBR055C YHR138CP38841 114 aaPredicted RBP1.07□□□□□ -2.24
PRP6YBR055C PRP8P33334 2413 aaKnown RBP1.07□□□□□ -2.24
PRP6YBR055C MRPS12P53732 153 aa1.06□□□□□ -2.24
PRP6YBR055C YCL001W-BQ96VH2 84 aa1.06□□□□□ -2.24
PRP6YBR055C IRA2P19158 3079 aa1.06□□□□□ -2.24
PRP6YBR055C LCL2Q08045 131 aa1.06□□□□□ -2.24
PRP6YBR055C YIL086CP40503 102 aa1.05□□□□□ -2.24
PRP6YBR055C RSM19P53733 91 aaPredicted RBP1.05□□□□□ -2.24
PRP6YBR055C LSM6Q06406 86 aaKnown RBP1.05□□□□□ -2.24
PRP6YBR055C YOR032W-AQ8TGS1 66 aa1.05□□□□□ -2.24
PRP6YBR055C HUG1Q6Q5K6 68 aa1.05□□□□□ -2.24
PRP6YBR055C MDN1Q12019 4910 aaKnown RBP1.04□□□□□ -2.24
PRP6YBR055C CCW14O13547 238 aa1.04□□□□□ -2.24
PRP6YBR055C RPL37AP49166 88 aaKnown RBP1.04□□□□□ -2.24
PRP6YBR055C HHY1P39982 102 aa1.04□□□□□ -2.24
PRP6YBR055C MVB12P42939 101 aa1.04□□□□□ -2.24
PRP6YBR055C YHL005CP38752 130 aa1.03□□□□□ -2.24
PRP6YBR055C SRB6P32570 121 aa1.03□□□□□ -2.24
PRP6YBR055C YOL118CQ08259 102 aa1.03□□□□□ -2.24
PRP6YBR055C YCR075W-AQ3E830 75 aa1.03□□□□□ -2.24
PRP6YBR055C YHR213W-BQ8TGK1 99 aa1.03□□□□□ -2.24
PRP6YBR055C POL2P21951 2222 aaKnown RBP1.03□□□□□ -2.25
PRP6YBR055C YDR210WQ03482 75 aa1.02□□□□□ -2.25
PRP6YBR055C EMC5P40540 141 aa1.02□□□□□ -2.25
PRP6YBR055C RRT15Q3E811 62 aa1.02□□□□□ -2.25
PRP6YBR055C PAU5P43575 122 aa1.02□□□□□ -2.25
PRP6YBR055C Q0297Q9ZZV8 51 aa1.02□□□□□ -2.25
PRP6YBR055C ROX3P25046 220 aa1.01□□□□□ -2.25
PRP6YBR055C MSL1P40567 111 aaPredicted RBP1.01□□□□□ -2.25
PRP6YBR055C IMP2P46972 177 aa1.01□□□□□ -2.25
PRP6YBR055C LCL1Q02786 101 aa1.01□□□□□ -2.25
PRP6YBR055C CSF1Q12150 2958 aa1.01□□□□□ -2.25
PRP6YBR055C HFA1P32874 2273 aa1.01□□□□□ -2.25
PRP6YBR055C HMRA1P0CY11 126 aa1.01□□□□□ -2.25
PRP6YBR055C YCR095W-AQ3E787 52 aa1.01□□□□□ -2.25
PRP6YBR055C YMR141CP40211 102 aa1□□□□□ -2.25
PRP6YBR055C YDR029WQ12111 104 aa1□□□□□ -2.25
PRP6YBR055C UTP20P35194 2493 aaKnown RBP0.99□□□□□ -2.25
PRP6YBR055C YLR255CO13574 117 aa0.99□□□□□ -2.25
PRP6YBR055C YJR128WP47162 119 aa0.99□□□□□ -2.25
PRP6YBR055C YMR082CQ04276 118 aa0.98□□□□□ -2.25
PRP6YBR055C YPL038W-AQ3E7B4 63 aa0.98□□□□□ -2.25
PRP6YBR055C TRA1P38811 3744 aa0.98□□□□□ -2.25
PRP6YBR055C GCV3P39726 170 aaPredicted RBP0.97□□□□□ -2.25
PRP6YBR055C YDR042CQ03205 200 aa0.97□□□□□ -2.25
PRP6YBR055C RSM18P40033 138 aa0.96□□□□□ -2.26
PRP6YBR055C YGL194C-AQ2V2P6 80 aa0.96□□□□□ -2.26
PRP6YBR055C YOR034C-AQ3E735 80 aa0.96□□□□□ -2.26
PRP6YBR055C SNU13P39990 126 aaKnown RBP0.96□□□□□ -2.26
PRP6YBR055C SNA2P56508 79 aa0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms