RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PRPSAP2O60256 369 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 AKR1A1P14550 325 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 GNL1P36915 607 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 MAGEA4P43358 317 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 MMP13P45452 471 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 TNFAIP8L3Q5GJ75 292 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 NPNTQ6UXI9 565 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 SRLQ86TD4 932 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 TMEM110Q86TL2 294 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 FAM228AQ86W67 206 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 CLEC4CQ8WTT0 213 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 KHSRPQ92945 711 aaKnown RBP eCLIP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 NGRNQ9NPE2 291 aaKnown RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 FOXO6A8MYZ6 492 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 IGHA2P01877 340 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 SETSIPP0DME0 302 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 GNAT1P11488 350 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 KCNE1P15382 129 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 CDR1P51861 262 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 RNASEH2BQ5TBB1 312 aaKnown RBP18.7■□□□□ 0.58
PHGDH-226ENST00000641756 MFSD5Q6N075 450 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 ZNF560Q96MR9 790 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 GOLGA8MH3BSY2 632 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 TRAPPC3O43617 180 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 TAF6P49848 677 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 EIF3EP60228 445 aaKnown RBP18.7■□□□□ 0.58
PHGDH-226ENST00000641756 FASTKD3Q14CZ7 662 aaKnown RBP18.7■□□□□ 0.58
PHGDH-226ENST00000641756 XKR4Q5GH76 650 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 ARHGAP17Q68EM7 881 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 UNC45BQ8IWX7 931 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 FAM172AQ8WUF8 416 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 RSAD2Q8WXG1 361 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 MAK16Q9BXY0 300 aaKnown RBP18.7■□□□□ 0.58
PHGDH-226ENST00000641756 STMN4Q9H169 189 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-226ENST00000641756 SNX25Q9H3E2 840 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 RSAD1Q9HA92 442 aa18.7■□□□□ 0.58
PHGDH-226ENST00000641756 GMNCA6NCL1 334 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 APOC4-APOC2K7ER74 178 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 XPOTO43592 962 aaKnown RBP18.69■□□□□ 0.58
PHGDH-226ENST00000641756 APOC2P02655 101 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 HOXC8P31273 242 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 SDC4P31431 198 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 DPYSL3Q14195 570 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 MORF4L2Q15014 288 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 ZC3H12AQ5D1E8 599 aaKnown RBP18.69■□□□□ 0.58
PHGDH-226ENST00000641756 GNASQ5JWF2 1037 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 FAM182AQ5T1J6 154 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 EXOC3L1Q86VI1 746 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 RELL1Q8IUW5 271 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 NME8Q8N427 588 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 APPL2Q8NEU8 664 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 SERPINB12Q96P63 405 aa18.69■□□□□ 0.58
PHGDH-226ENST00000641756 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.69■□□□□ 0.58
PHGDH-226ENST00000641756 ENDOD1O94919 500 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 FAM107AO95990 144 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 SLC10A3P09131 477 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 LCP1P13796 627 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 TFE3P19532 575 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 IGFBP6P24592 240 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 NRLP54845 237 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 KRT81Q14533 505 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CCDC142Q17RM4 750 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CXCL17Q6UXB2 119 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 ZFP42Q96MM3 310 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 FRMD8P1Q9BZ68 369 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 FOXP3Q9BZS1 431 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 ARHGAP39Q9C0H5 1083 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 GDAP2Q9NXN4 497 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CACNG4Q9UBN1 327 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 MEIS3P2A8K0S8 358 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 DPYSL4O14531 572 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 BANF1O75531 89 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 PGK1P00558 417 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CTSHP09668 335 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 RPL22P35268 128 aaKnown RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 PNPLA4P41247 253 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 GAD2Q05329 585 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 SV2CQ496J9 727 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CAPN12Q6ZSI9 719 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 ZC3H18Q86VM9 953 aaKnown RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 OSTM1Q86WC4 334 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 ADGRF2Q8IZF7 708 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CRYBG2Q8N1P7 616 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 FAM71DQ8N9W8 422 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 ANKRD52Q8NB46 1076 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 SPATA18Q8TC71 538 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 SLC2A14Q8TDB8 520 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 PRCCQ92733 491 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 XPO6Q96QU8 1125 aaKnown RBP18.68■□□□□ 0.58
PHGDH-226ENST00000641756 TBK1Q9UHD2 729 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 CDY2AQ9Y6F7 541 aa18.68■□□□□ 0.58
PHGDH-226ENST00000641756 SRRM3A6NNA2 597 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 PTGESO14684 152 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 MCF2LO15068 1137 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 DUSP11O75319 330 aaKnown RBP18.67■□□□□ 0.58
PHGDH-226ENST00000641756 RBP3P10745 1247 aa18.67■□□□□ 0.58
PHGDH-226ENST00000641756 CREB1P16220 341 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms