RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 KIAA1551Q9HCM1 1747 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 IRS2Q9Y4H2 1338 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 ITM2AO43736 263 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 CDK4P11802 303 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 MAN1A1P33908 653 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 SLC1A1P43005 524 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 ACOT2P49753 483 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 PLOD1Q02809 727 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-227ENST00000640957 ORC1Q13415 861 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 TAF5Q15542 800 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 KRT39Q6A163 491 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 TTLL6Q8N841 843 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 RNF169Q8NCN4 708 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 NAP1L4Q99733 375 aaKnown RBP14.33□□□□□ -0.12
SCARB2-227ENST00000640957 GLIS2Q9BZE0 524 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-227ENST00000640957 TMEM39BQ9GZU3 492 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 FAM198AQ9UFP1 575 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 TAGLN3Q9UI15 199 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 PCDHB4Q9Y5E5 795 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 LRP5O75197 1615 aa14.33□□□□□ -0.12
SCARB2-227ENST00000640957 TMX2-CTNND1H3BSU7 103 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MAPK10P53779 464 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 WNT7BP56706 349 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 RPL10AP62906 217 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TSHZ1Q6ZSZ6 1077 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 APLFQ8IW19 511 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 UNC5BQ8IZJ1 945 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ICA1LQ8NDH6 482 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 FBXL13Q8NEE6 735 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 E2F7Q96AV8 911 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 FAM20AQ96MK3 541 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TJP2Q9UDY2 1190 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ATRNL1Q5VV63 1379 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TCRBV9S1A1TA0A576 114 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CST8O60676 142 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TFAP2AP05549 437 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 PABPC4LP0CB38 370 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 EIF2AK2P19525 551 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CENPCQ03188 943 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CBX3Q13185 183 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CCNIQ14094 377 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NRF1Q16656 503 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TRMT5Q32P41 509 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 EFHC2Q5JST6 749 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NET1Q7Z628 596 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ALLCQ8N6M5 410 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 EMC1Q8N766 993 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ATP11CQ8NB49 1132 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MORC4Q8TE76 937 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 PGLYRP2Q96PD5 576 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NACC1Q96RE7 527 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 VPS11Q9H270 941 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 PLA2G4CQ9UP65 541 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ZNF510Q9Y2H8 683 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 A8MXQ7 604 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CYP3A7P24462 503 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 CHN2P52757 468 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NCKAP1LP55160 1127 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MRPS22P82650 360 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MAP3K10Q02779 954 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 DPY19L2Q6NUT2 758 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 SYDE1Q6ZW31 735 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 SH3BP5LQ7L8J4 393 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MIER3Q7Z3K6 550 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 NETO2Q8NC67 525 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 FAM156AQ8NDB6 213 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 POLR3CQ9BUI4 534 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 DDX43Q9NXZ2 648 aaKnown RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MAGED2Q9UNF1 606 aaPredicted RBP14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
SCARB2-227ENST00000640957 MYPNQ86TC9 1320 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 MTA2O94776 668 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 FGFR3P22607 806 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
SCARB2-227ENST00000640957 OGDHQ02218 1023 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 ANKDD1AQ495B1 522 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 ATXN7L3BQ96GX2 97 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 SLITRK1Q96PX8 696 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 GLT8D2Q9H1C3 349 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 SENP1Q9P0U3 644 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 ABHD2P08910 425 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 SREBF1P36956 1147 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 PRELPP51888 382 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 PKNOX1P55347 436 aa14.31□□□□□ -0.12
SCARB2-227ENST00000640957 CNGA3Q16281 694 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms