RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 FAM189A1O60320 539 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 MSCO60682 206 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 TOM1L1O75674 476 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 ATP5OP48047 213 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 C15orf59Q2T9L4 293 aaPredicted RBP17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 ANO7Q6IWH7 933 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 C4orf50Q6ZRC1 276 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 CYTH2Q99418 400 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
HNRNPU-228ENST00000640306 SIGLEC16A6NMB1 481 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 F5H423 210 aaPredicted RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 PRKCBP05771 671 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 PSEN1P49768 467 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 STAT5BP51692 787 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 CDH6P55285 790 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 MICALL2Q8IY33 904 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 WDR60Q8WVS4 1066 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 PIWIL1Q96J94 861 aaKnown RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 PEBP4Q96S96 227 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 MRPL4Q9BYD3 311 aaKnown RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 SMYD3Q9H7B4 428 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 KCNK13Q9HB14 408 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 RAB6BQ9NRW1 208 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 USP18Q9UMW8 372 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 UGT1A9O60656 530 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 CXCL8P10145 99 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 PTPRAP18433 802 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 IRX4P78413 519 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 TNFAIP1Q13829 316 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 FAM102AQ5T9C2 384 aaPredicted RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 DHRS4Q9BTZ2 278 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 XYLT2Q9H1B5 865 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 UGT1A7Q9HAW7 530 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 UGT1A10Q9HAW8 530 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 UGT1A8Q9HAW9 530 aa17.27■□□□□ 0.36
HNRNPU-228ENST00000640306 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 TRIM49D1C9J1S8 452 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 CYB561D2O14569 222 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 POLR2BP30876 1174 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 LY6KQ17RY6 165 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 ACSBG2Q5FVE4 666 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 EEF1DP3Q658K8 133 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 PPP1R2P3Q6NXS1 205 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 SCYL2Q6P3W7 929 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 XYLT1Q86Y38 959 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 NIPA2Q8N8Q9 360 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 BTBD10Q9BSF8 475 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 NMUR2Q9GZQ4 415 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 IQCGQ9H095 443 aaKnown RBP17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 SDCBP2Q9H190 292 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 VPS33BQ9H267 617 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 VPS11Q9H270 941 aa17.27■□□□□ 0.35
HNRNPU-228ENST00000640306 DPPA5A6NC42 116 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 OGTO15294 1046 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 TM9SF1O15321 606 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 GSC2O15499 205 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 CCDC22O60826 627 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 TOP3BO95985 862 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 HOXC6P09630 235 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 PTPN7P35236 360 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 TCF7P36402 384 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 CCNG1P51959 295 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 RCN2Q14257 317 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 POLNQ7Z5Q5 900 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 FBXO27Q8NI29 283 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 DNAJC9Q8WXX5 260 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 M0QYV0 167 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 RNF8O76064 485 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ATG7O95352 703 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ROR1Q01973 937 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 TAP1Q03518 808 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 LAMTOR4Q0VGL1 99 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 TTC13Q8NBP0 860 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ZNF518BQ9C0D4 1074 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 NMRK1Q9NWW6 199 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 ZFATQ9P243 1243 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 LRRC42Q9Y546 428 aa17.26■□□□□ 0.35
HNRNPU-228ENST00000640306 COL11A1P12107 1806 aaPredicted RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 PSME4Q14997 1843 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 IQANK1A0A1B0GTG1 560 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 LINGO3P0C6S8 592 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 SERPINB4P48594 390 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 ARMC2Q8NEN0 867 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 UCMAQ8WVF2 138 aa17.25■□□□□ 0.35
HNRNPU-228ENST00000640306 NSL1Q96IY1 281 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms