RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 PRSS55Q6UWB4 352 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 SPATA2LQ8IUW3 424 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 SPATA4Q8NEY3 305 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 UBXN4Q92575 508 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ACSF2Q96CM8 615 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 IGSF21Q96ID5 467 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 YME1L1Q96TA2 773 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 AP1M1Q9BXS5 423 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ZCWPW1Q9H0M4 648 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 KLHL11Q9NVR0 708 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ABI2Q9NYB9 513 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ZMYND8Q9ULU4 1186 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 MRPL42Q9Y6G3 142 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 FNDC1Q4ZHG4 1894 aaPredicted RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 C2CD4BA6NLJ0 364 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 C2CD2LO14523 706 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 EFCAB14O75071 495 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 FGGP02679 453 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 CTNNA2P26232 953 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 GRIK1P39086 918 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ACADSBP45954 432 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 RWDD2BP57060 319 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 CKAP4Q07065 602 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 PPIGQ13427 754 aaKnown RBP eCLIP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 MAPRE1Q15691 268 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ELF2Q15723 593 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 KCNT1Q5JUK3 1230 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ZFYVE27Q5T4F4 411 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 RSRC2Q7L4I2 434 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 ATAD1Q8NBU5 361 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 KCTD13Q8WZ19 329 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 HINFPQ9BQA5 517 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 TTPALQ9BTX7 342 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 VN1R3Q9BXE9 311 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 CARD9Q9H257 536 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 RC3H2Q9HBD1 1191 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 RBM12Q9NTZ6 932 aaKnown RBP10.99□□□□□ -0.65
NECAP1-223ENST00000640091 PCSK1NQ9UHG2 260 aa10.99□□□□□ -0.65
NECAP1-223ENST00000640091 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 LRCH4O75427 683 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 USP17L7P0C7H9 530 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 RPL17P18621 184 aaKnown RBP10.98□□□□□ -0.65
NECAP1-223ENST00000640091 TFE3P19532 575 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-223ENST00000640091 GPD1P21695 349 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ZNF143P52747 638 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-223ENST00000640091 MRPS5P82675 430 aaKnown RBP10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ADCY1Q08828 1119 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 CCDC14Q49A88 953 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 TMEM240Q5SV17 173 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 SDHAF4Q5VUM1 108 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ZDHHC17Q8IUH5 632 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 RHOT1Q8IXI2 618 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 SIX6OS1Q8N1H7 587 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 STKLD1Q8NE28 680 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 SCAMP5Q8TAC9 235 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ACTRT1Q8TDG2 376 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 FAM149B1Q96BN6 582 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ULBP1Q9BZM6 244 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 ZWILCHQ9H900 591 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 CSNK1G1Q9HCP0 422 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 RNF14Q9UBS8 474 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 NR2E1Q9Y466 385 aa10.98□□□□□ -0.65
NECAP1-223ENST00000640091 CES2O00748 559 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 RHOXF2BP0C7M4 288 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 CPB1P15086 417 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 IL1R2P27930 398 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 MAN1A1P33908 653 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 IFRD2Q12894 506 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 ELAVL2Q12926 359 aaKnown RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 DDR2Q16832 855 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 LONRF2Q1L5Z9 754 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 SMTNL2Q2TAL5 461 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 ZNF280DQ6N043 979 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 C4orf50Q6ZRC1 276 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 HFE2Q6ZVN8 426 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 SCN4BQ8IWT1 228 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 DCP1BQ8IZD4 617 aaKnown RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 RASGEF1CQ8N431 466 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 TTC9BQ8N6N2 239 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 NIPA2Q8N8Q9 360 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 FNIP1Q8TF40 1166 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 GOLGA1Q92805 767 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 RHOXF2Q9BQY4 288 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 PLEKHA4Q9H4M7 779 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 DMAP1Q9NPF5 467 aaPredicted RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 CYLDQ9NQC7 956 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 SLC27A5Q9Y2P5 690 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 CDH23Q9H251 3354 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 TCRBV7S2A1N4TA0A589 114 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 YJEFN3A6XGL0 299 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 E7ENQ6 273 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 PI4K2BG5E9Z4 385 aa10.97□□□□□ -0.65
NECAP1-223ENST00000640091 PGRMC1O00264 195 aaKnown RBP10.97□□□□□ -0.65
NECAP1-223ENST00000640091 ADAM12O43184 909 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms