RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	NSMCE3	Q96MG7	304 aa		11.78	□□□□□ -0.52
SPIN3-231	ENST00000639895	LINC00854	A0A1B0GVQ3	168 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895		H0YIN7	160 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	PSMD12	O00232	456 aa	Predicted RBP	11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	RGL2	O15211	777 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	VEGFA	P15692	232 aa	Predicted RBP	11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	CSE1L	P55060	971 aa	Known RBP	11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	CENPC	Q03188	943 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	BMPR2	Q13873	1038 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	SF3B3	Q15393	1217 aa	Known RBP	11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	PDPK2P	Q6A1A2	396 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	POTEH	Q6S545	545 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	C3orf67	Q6ZVT6	689 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	IFNE	Q86WN2	208 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	FBXW8	Q8N3Y1	598 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	CPA5	Q8WXQ8	436 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	BTBD9	Q96Q07	612 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	MIPEP	Q99797	713 aa		11.77	□□□□□ -0.52
SPIN3-231	ENST00000639895	MST1R	Q04912	1400 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UBE4B	O95155	1302 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ATP9B	O43861	1147 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	SPAG6	O75602	509 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZSCAN5DP	P0CG00	497 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	BCAP31	P51572	246 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	BST1	Q10588	318 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ASTE1	Q2TB18	679 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	KCTD6	Q8NC69	237 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	MCU	Q8NE86	351 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZFP28	Q8NHY6	868 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC10A4	Q96EP9	437 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	SRPK1	Q96SB4	655 aa	Known RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	HEPH	Q9BQS7	1158 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	MRPL40	Q9NQ50	206 aa	Known RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ANGPTL3	Q9Y5C1	460 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	RGPD1	P0DJD0	1748 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	BTNL10	A8MVZ5	291 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A9	O60656	530 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZBED1	O96006	694 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	RARB	P10826	455 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A6	P19224	532 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A1	P22309	533 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A4	P22310	534 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	RPA1	P27694	616 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A3	P35503	534 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A5	P35504	534 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	FOXB2	Q5VYV0	432 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	OGFOD2	Q6N063	350 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	GALNT18	Q6P9A2	607 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	USP17L6P	Q6QN14	398 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	GET4	Q7L5D6	327 aa	Predicted RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	SCFD1	Q8WVM8	642 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	EHMT1	Q9H9B1	1298 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A7	Q9HAW7	530 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A10	Q9HAW8	530 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	UGT1A8	Q9HAW9	530 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	CD209	Q9NNX6	404 aa		11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.77	□□□□□ -0.53
SPIN3-231	ENST00000639895	TOPAZ1	Q8N9V7	1692 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SH3PXD2B	A1X283	911 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	PSMD11	O00231	422 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SORBS3	O60504	671 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	TMEM191B	P0C7N4	346 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	IST1	P53990	364 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	EIF3E	P60228	445 aa	Known RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	CENPS	Q8N2Z9	138 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	CCDC24	Q8N4L8	307 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SETD1A	O15047	1707 aa	Known RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	NOL4	O94818	638 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC16A2	P36021	539 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	RAD23A	P54725	363 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	RPL10A	P62906	217 aa	Known RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC15A2	Q16348	729 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	PPP6R3	Q5H9R7	873 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	TJAP1	Q5JTD0	557 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	ACSF2	Q96CM8	615 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	DCLK3	Q9C098	648 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	GAN	Q9H2C0	597 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	NFAT5	O94916	1531 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895		F5H423	210 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	RXRG	P48443	463 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC12A2	P55011	1212 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	KRT72	Q14CN4	511 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	SLC2A7	Q6PXP3	512 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	FAM47B	Q8NA70	645 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	GLMN	Q92990	594 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	TRIM63	Q969Q1	353 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	CHID1	Q9BWS9	393 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	FER1L4	A9Z1Z3	1794 aa		11.76	□□□□□ -0.53
SPIN3-231	ENST00000639895	NALCN	Q8IZF0	1738 aa		11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	CLOCK	O15516	846 aa		11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	PHGDH	O43175	533 aa	Known RBP	11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	EIF2S1	P05198	315 aa	Known RBP	11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	THRA	P10827	490 aa		11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	NAT1	P18440	290 aa		11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	TFE3	P19532	575 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	ETFB	P38117	255 aa		11.75	□□□□□ -0.53
SPIN3-231	ENST00000639895	MAP3K10	Q02779	954 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms