RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 LOC100506127A0A0U1RQW1 187 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PRKAR1AP10644 381 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CACNA2D1P54289 1103 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 MPP2Q14168 576 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 MINDY2Q8NBR6 621 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 FAM217BQ9NTX9 383 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 USP19O94966 1318 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 WEE2P0C1S8 567 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 NEK6Q9HC98 313 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 MYRFQ9Y2G1 1151 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PCNAP12004 261 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CYP24A1Q07973 514 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 KCTD21Q4G0X4 260 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PYDC2Q56P42 97 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 SEL1L3Q68CR1 1132 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 TCAIMQ8N3R3 496 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 POTECB2RU33 542 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 COASYQ13057 564 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 TRMT5Q32P41 509 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ZNF605Q86T29 641 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PAK5Q9P286 719 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 BAIAP2Q9UQB8 552 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 C4orf46Q504U0 113 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ATG14Q6ZNE5 492 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 SLC7A14Q8TBB6 771 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 UQCRBP14927 111 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 MSR1P21757 451 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CBX5P45973 191 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CEBPGP53567 150 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 TAF5Q15542 800 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 INTS2Q9H0H0 1204 aaKnown RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 RBAKQ9NYW8 714 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 HLA-DQA2P01906 255 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ITGADQ13349 1161 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ERICH5Q6P6B1 374 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 TPD52L3Q96J77 140 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ADAM33Q9BZ11 813 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CRNNQ9UBG3 495 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 VPS26AO75436 327 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 BNC1Q01954 994 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 GRIK3Q13003 919 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 CDC25AP30304 524 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 NFYCQ13952 458 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 FASP25445 335 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 C5orf22Q49AR2 442 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 B3GALNT2Q8NCR0 500 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 IPMKQ8NFU5 416 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 POLR3FQ9H1D9 316 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 CIDEBQ9UHD4 219 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 UTYO14607 1347 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 ZW10O43264 779 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 RGS10O43665 173 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 POLD3Q15054 466 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 DOK7Q18PE1 504 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 LEMD2Q8NC56 503 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 MLXQ9UH92 298 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 TRAPPC3O43617 180 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 KLHL41O60662 606 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 C2orf81A6NN90 581 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 MTSS1O43312 755 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 ANXA6P08133 673 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 UBE2SQ16763 222 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 SLC25A41Q8N5S1 370 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 GPRASP2Q96D09 838 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 MAGEB18Q96M61 343 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 PLOD3O60568 738 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 TGM2P21980 687 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 EIF4A1P60842 406 aaKnown RBP13.54□□□□□ -0.24
UBE3A-228ENST00000638155 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
UBE3A-228ENST00000638155 STK33Q9BYT3 514 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms