RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CASC4Q6P4E1 433 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 PPP1R21Q6ZMI0 780 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 SNX27Q96L92 541 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CNPY3Q9BT09 278 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 NFKBIZQ9BYH8 718 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 BCO2Q9BYV7 579 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 GNEQ9Y223 722 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 NR2E3Q9Y5X4 410 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 MAD1L1Q9Y6D9 718 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 IKBKGQ9Y6K9 419 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 LIASO43766 372 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 PECAM1P16284 738 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 MAGEA4P43358 317 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CTCFP49711 727 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 ARPP19P56211 112 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 SNX16P57768 344 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 ADIGQ0VDE8 80 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CD302Q8IX05 232 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 MSL3Q8N5Y2 521 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 PYROXD1Q8WU10 500 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 FAF2Q96CS3 445 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CEP41Q9BYV8 373 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 MAGEB5Q9BZ81 275 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 PSD3Q9NYI0 1048 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CNTN6Q9UQ52 1028 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 SPTLC1O15269 473 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 SPAG7O75391 227 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 CHN1P15882 459 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 SREBF2Q12772 1141 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 IFT88Q13099 833 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 BBOF1Q8ND07 529 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 EMID1Q96A84 441 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 RAB6BQ9NRW1 208 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 TPX2Q9ULW0 747 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 LOXHD1Q8IVV2 1947 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 GOLGA6L7A0A1B0GV03 622 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 AOC2O75106 756 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 ITGBL1O95965 494 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 THP07101 528 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 CYP3A5P20815 502 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 GBP2P32456 591 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 CDKN2BP42772 138 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 VCPP55072 806 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 GDF10P55107 478 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 FASTKD3Q14CZ7 662 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 TAOK1Q7L7X3 1001 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 ART4Q93070 314 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 MTG1Q9BT17 334 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 STMN4Q9H169 189 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 DDX43Q9NXZ2 648 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 WHRNQ9P202 907 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 ASGR1P07306 291 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 APRTP07741 180 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PRKAR2AP13861 404 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 CRYBB1P53674 252 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PURAQ00577 322 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 ROR1Q01973 937 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 RNASELQ05823 741 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PPP2R5DQ14738 602 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 SV2CQ496J9 727 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 MORN1Q5T089 497 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 GDF6Q6KF10 455 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 LCLAT1Q6UWP7 414 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 UNC45BQ8IWX7 931 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 CABS1Q96KC9 395 aa10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 KLF6Q99612 283 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PIH1D1Q9NWS0 290 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 PRG3Q9Y2Y8 225 aaPredicted RBP10.12□□□□□ -0.79
CACNA1A-248ENST00000637774 RBBP6Q7Z6E9 1792 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 WDR91A4D1P6 747 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 RASA4BC9J798 803 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PAPSS1O43252 624 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 RASA4O43374 803 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 FGFR1P11362 822 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 BRAFP15056 766 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CREB1P16220 341 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 NDUFV1P49821 464 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SULT1E1P49888 294 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 LIG3P49916 1009 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 DRG2P55039 364 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 LILRA4P59901 499 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 GAD2Q05329 585 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PTK6Q13882 451 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PTGISQ16647 500 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 HIF1AQ16665 826 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CYP1B1Q16678 543 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 C17orf99Q6UX52 265 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms