RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	HM13	Q8TCT9	377 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	SLC44A1	Q8WWI5	657 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	ACAP3	Q96P50	834 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	THAP1	Q9NVV9	213 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	RAB20	Q9NX57	234 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	ZBTB1	Q9Y2K1	713 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	COQ6	Q9Y2Z9	468 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	SNCAIP	Q9Y6H5	919 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	FUOM	A2VDF0	154 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	FOS	P01100	380 aa	Predicted RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	PSMC3	P17980	439 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	BCAP31	P51572	246 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	HIRA	P54198	1017 aa	Predicted RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	ALDH18A1	P54886	795 aa	Known RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	PSMC6	P62333	389 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	ESRRG	P62508	458 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	KCNA1	Q09470	495 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	BST1	Q10588	318 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	NFX1	Q12986	1120 aa	Known RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	NDUFA5	Q16718	116 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	NSMF	Q6X4W1	530 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	TRIM72	Q6ZMU5	477 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	SH2D5	Q6ZV89	423 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	TICAM1	Q8IUC6	712 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	TSPAN14	Q8NG11	270 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	SRPK1	Q96SB4	655 aa	Known RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	EPS15L1	Q9UBC2	864 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	PLLP	Q9Y342	182 aa		13.6	□□□□□ -0.23
PCCA-215	ENST00000637657	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	KDM4F	A0A1W2PPD8	638 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	CYP26A1	O43174	497 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	NTSR2	O95665	410 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	OCM2	P0CE71	109 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	OCM	P0CE72	109 aa	Predicted RBP	13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	ADGRE1	Q14246	886 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	C16orf72	Q14CZ0	275 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	TEX44	Q53QW1	395 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	STXBP5	Q5T5C0	1151 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	C1orf186	Q6ZWK4	172 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	USP37	Q86T82	979 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	SLC47A2	Q86VL8	602 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	EME1	Q96AY2	570 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	ZMAT2	Q96NC0	199 aa	Known RBP	13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	OLFM1	Q99784	485 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	HERPUD2	Q9BSE4	406 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	HEMGN	Q9BXL5	484 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	JMJD4	Q9H9V9	463 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	ARHGAP26	Q9UNA1	814 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	CDK5RAP2	Q96SN8	1893 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	MYPN	Q86TC9	1320 aa		13.59	□□□□□ -0.23
PCCA-215	ENST00000637657	LDHB	P07195	334 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	ENPEP	Q07075	957 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	OASL	Q15646	514 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	FSCB	Q5H9T9	825 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	RC3H1	Q5TC82	1133 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	CLEC4G	Q6UXB4	293 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	NUDCD3	Q8IVD9	361 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	SLC2A11	Q9BYW1	496 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	SMYD3	Q9H7B4	428 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	PNPLA8	Q9NP80	782 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	GIN1	Q9NXP7	522 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	STK39	Q9UEW8	545 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	HERC5	Q9UII4	1024 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	GNPTG	Q9UJJ9	305 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	VPS28	Q9UK41	221 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	PTBP2	Q9UKA9	531 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	MINPP1	Q9UNW1	487 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	B3GNT3	Q9Y2A9	372 aa		13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	TDRKH	Q9Y2W6	561 aa	Known RBP	13.58	□□□□□ -0.23
PCCA-215	ENST00000637657	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657		H3BSA7	217 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	ADCY6	O43306	1168 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	BMP10	O95393	424 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	UNG	P13051	313 aa	Predicted RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	NMT1	P30419	496 aa	Known RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	ZNF543	Q08ER8	600 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	DPYS	Q14117	519 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	CHRNA2	Q15822	529 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	ANGEL2	Q5VTE6	544 aa	Known RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	RSPH3	Q86UC2	560 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	SLC26A11	Q86WA9	606 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	CPNE8	Q86YQ8	564 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	PPM1K	Q8N3J5	372 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	CHPT1	Q8WUD6	406 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	CRYGN	Q8WXF5	182 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	DDX1	Q92499	740 aa	Known RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	CNBD2	Q96M20	576 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	DDX56	Q9NY93	547 aa	Known RBP	13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	DNPEP	Q9ULA0	475 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	COQ4	Q9Y3A0	265 aa		13.58	□□□□□ -0.24
PCCA-215	ENST00000637657	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PCCA-215	ENST00000637657	SNRPA	P09012	282 aa	Known RBP	13.57	□□□□□ -0.24
PCCA-215	ENST00000637657	C6orf222	P0C671	652 aa	Predicted RBP	13.57	□□□□□ -0.24
PCCA-215	ENST00000637657	THRA	P10827	490 aa		13.57	□□□□□ -0.24
PCCA-215	ENST00000637657	STAT3	P40763	770 aa		13.57	□□□□□ -0.24
PCCA-215	ENST00000637657	NSF	P46459	744 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms