RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 CACNA2D1P54289 1103 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 GYS2P54840 703 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 PRMT2P55345 433 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 ADIGQ0VDE8 80 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 TFDP3Q5H9I0 405 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 CLLU1OSQ5K130 101 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 STK32AQ8WU08 396 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 MAIP1Q8WWC4 291 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 TMEM30AQ9NV96 361 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 MKI67P46013 3256 aaKnown RBP22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 SYF2O95926 243 aaKnown RBP22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 KRT7P08729 469 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 VPS41P49754 854 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 ATXN1P54253 815 aaKnown RBP22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 TUSC3Q13454 348 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 CLEC20AQ6ZU45 233 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 ZNF280BQ86YH2 543 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 FAM126BQ8IXS8 530 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 FBXO25Q8TCJ0 367 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 FAM172AQ8WUF8 416 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 PCED1BQ96HM7 432 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 RTP3Q9BQQ7 232 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 DUSP16Q9BY84 665 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 GPATCH2LQ9NWQ4 482 aa22.71■■□□□ 1.23
CHRNA7-228ENST00000637519 NBNO60934 754 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 NPR3P17342 541 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 MAP3K7CLP57077 242 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 GPNMBQ14956 572 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 SCYL2Q6P3W7 929 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 DNPEPQ9ULA0 475 aa22.7■■□□□ 1.23
CHRNA7-228ENST00000637519 XPO1O14980 1071 aaKnown RBP22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 KDELR1P24390 212 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 CETN2P41208 172 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 NDUFV1P49821 464 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 SLC24A5Q71RS6 500 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 CTU1Q7Z7A3 348 aaKnown RBP22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 EIF1ADQ8N9N8 165 aaKnown RBP22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 PIK3R5Q8WYR1 880 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 ZIM3Q96PE6 472 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 FMO2Q99518 471 aa22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.7■■□□□ 1.22
CHRNA7-228ENST00000637519 DNM1LO00429 736 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 PQBP1O60828 265 aaKnown RBP22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 DDHD2O94830 711 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 TJP3O95049 919 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 SDC4P31431 198 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 LHX1P48742 406 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 CDK7P50613 346 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 ATN1P54259 1190 aaPredicted RBP22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 MMRN1Q13201 1228 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 CCNG2Q16589 344 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 TMEM86AQ8N2M4 240 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 KCTD6Q8NC69 237 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 TMEM209Q96SK2 561 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 KCNK16Q96T55 309 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 CALN1Q9BXU9 219 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 ACBD3Q9H3P7 528 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 ASIC3Q9UHC3 531 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 TSC2P49815 1807 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 SKIP12755 728 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 SELPP16109 830 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 HSPA9P38646 679 aaKnown RBP22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 RPL34P49207 117 aaKnown RBP22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 UAP1Q16222 522 aaPredicted RBP22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 FAM35AQ86V20 835 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 RUNDC3BQ96NL0 473 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 UBN1Q9NPG3 1134 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 FAN1Q9Y2M0 1017 aa22.69■■□□□ 1.22
CHRNA7-228ENST00000637519 DPYSL4O14531 572 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 LIASO43766 372 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 ODC1P11926 461 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 PCK1P35558 622 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 COPS2P61201 443 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 ADCY1Q08828 1119 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 GPS2Q13227 327 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 TCTN1Q2MV58 587 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 ZC3H12AQ5D1E8 599 aaKnown RBP22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 GLB1LQ6UWU2 654 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 SLC26A9Q7LBE3 791 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 GPRIN1Q7Z2K8 1008 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 TMC3Q7Z5M5 1100 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 MREGQ8N565 214 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 GLIS1Q8NBF1 620 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 SLCO2A1Q92959 643 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 C10orf88Q9H8K7 445 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 PAK6Q9NQU5 681 aaPredicted RBP22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 CALCOCO1Q9P1Z2 691 aa22.68■■□□□ 1.22
CHRNA7-228ENST00000637519 PRPSAP2O60256 369 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 FAM200BP0CF97 657 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 PTPN7P35236 360 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 HSD17B3P37058 310 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 HDAC4P56524 1084 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 ACAP1Q15027 740 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 ZDHHC17Q8IUH5 632 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 DBF4BQ8NFT6 615 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 RSPH1Q8WYR4 309 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 HSFY1Q96LI6 401 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 SMOQ99835 787 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 DNAI2Q9GZS0 605 aa22.67■■□□□ 1.22
CHRNA7-228ENST00000637519 RNF208Q9H0X6 261 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms