RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ZNF518BQ9C0D4 1074 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 SDCBP2Q9H190 292 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 KIF9Q9HAQ2 790 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 THG1LQ9NWX6 298 aaKnown RBP19.55■□□□□ 0.72
CLN6-214ENST00000636314 EHD2Q9NZN4 543 aa19.55■□□□□ 0.72
CLN6-214ENST00000636314 CLDN5O00501 218 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 SLC30A4O14863 429 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 HRO43593 1189 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 KCNA4P22459 653 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 NOP14P78316 857 aaKnown RBP19.54■□□□□ 0.72
CLN6-214ENST00000636314 PPP3CAQ08209 521 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 SPOPLQ6IQ16 392 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 C1orf228Q6PIY5 440 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 PRR23CQ6ZRP0 262 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 CCDC150Q8NCX0 1101 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 TTC8Q8TAM2 541 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 TAS1R2Q8TE23 839 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 USP13Q92995 863 aaPredicted RBP19.54■□□□□ 0.72
CLN6-214ENST00000636314 C8orf48Q96LL4 319 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 MED10Q9BTT4 135 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 B3GNT5Q9BYG0 378 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 C8orf33Q9H7E9 229 aaPredicted RBP19.54■□□□□ 0.72
CLN6-214ENST00000636314 TMEM8AQ9HCN3 771 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.54■□□□□ 0.725e-7■■■■■ 90.8
CLN6-214ENST00000636314 TDP1Q9NUW8 608 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 CCL26Q9Y258 94 aa19.54■□□□□ 0.72
CLN6-214ENST00000636314 HELZP42694 1942 aaKnown RBP19.54■□□□□ 0.72
CLN6-214ENST00000636314 TRAV19A0A0A6YYK7 116 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 CKMP06732 381 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 ASPAP45381 313 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 MLLT6P55198 1093 aaPredicted RBP19.53■□□□□ 0.72
CLN6-214ENST00000636314 STIM1Q13586 685 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 Q6ZS52 159 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 FAM35AQ86V20 835 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 LONP2Q86WA8 852 aa19.53■□□□□ 0.72
CLN6-214ENST00000636314 MYH10P35580 1976 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 STX10O60499 249 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 USP17L7P0C7H9 530 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 TRIM21P19474 475 aaKnown RBP19.52■□□□□ 0.72
CLN6-214ENST00000636314 GTF2H1P32780 548 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 CNR2P34972 360 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 MXI1P50539 228 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 NDST1P52848 882 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 CACNA2D1P54289 1103 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 USP46P62068 366 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 ZNF268Q14587 947 aaPredicted RBP19.52■□□□□ 0.72
CLN6-214ENST00000636314 CSRP2Q16527 193 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 ST3GAL2Q16842 350 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 KRT39Q6A163 491 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 CEP68Q76N32 757 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 ACOT1Q86TX2 421 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
CLN6-214ENST00000636314 TTLL2Q9BWV7 592 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 NIF3L1Q9GZT8 377 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 TMEM30AQ9NV96 361 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 GTSE1Q9NYZ3 720 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 TRPM5Q9NZQ8 1165 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 HMGXB4Q9UGU5 601 aa19.52■□□□□ 0.72
CLN6-214ENST00000636314 SPAG17Q6Q759 2223 aa19.52■□□□□ 0.71
CLN6-214ENST00000636314 SPECC1L-ADORA2AF8WAN1 911 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 K7ESF4 209 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 PSMA7O14818 248 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 GADD45BO75293 160 aaPredicted RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 PDE6CP51160 858 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 FKBP3Q00688 224 aaKnown RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 LRRC63Q05C16 580 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 TNK2Q07912 1038 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 IFRD2Q12894 506 aaPredicted RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 ORC1Q13415 861 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 DCAF17Q5H9S7 520 aaPredicted RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 DGKKQ5KSL6 1271 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 ANKRD40Q6AI12 368 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 CC2D1AQ6P1N0 951 aaPredicted RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 TXNDC11Q6PKC3 985 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 UNC93AQ86WB7 457 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 TTC16Q8NEE8 873 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 SMARCD1Q96GM5 515 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 DMAP1Q9NPF5 467 aaPredicted RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 KRT82Q9NSB4 513 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 MAN1B1Q9UKM7 699 aa19.51■□□□□ 0.71
CLN6-214ENST00000636314 MAP1BP46821 2468 aaKnown RBP19.51■□□□□ 0.71
CLN6-214ENST00000636314 C2orf78A6NCI8 922 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 TRIM49BA6NDI0 452 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 GDF9O60383 454 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 PAPSS2O95340 614 aaPredicted RBP19.5■□□□□ 0.71
CLN6-214ENST00000636314 CTHP32929 405 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 PPP1R2P41236 205 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 PMS1P54277 932 aaKnown RBP19.5■□□□□ 0.71
CLN6-214ENST00000636314 PON2Q15165 354 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 WDR44Q5JSH3 913 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 TCERG1LQ5VWI1 586 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 RALGPS2Q86X27 583 aaPredicted RBP19.5■□□□□ 0.71
CLN6-214ENST00000636314 FAM160A2Q8N612 972 aaPredicted RBP19.5■□□□□ 0.71
CLN6-214ENST00000636314 ARL14EPQ8N8R7 260 aaPredicted RBP19.5■□□□□ 0.71
CLN6-214ENST00000636314 SLITRK1Q96PX8 696 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 SLC22A12Q96S37 553 aa19.5■□□□□ 0.71
CLN6-214ENST00000636314 CYP3A43Q9HB55 503 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms