RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MFSD7Q6UXD7 560 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 LRRC6Q86X45 466 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 AGGF1Q8N302 714 aaeCLIP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ANKRD52Q8NB46 1076 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 RAPGEF5Q92565 580 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 HSPH1Q92598 858 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 YY1AP1Q9H869 796 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 XPO7Q9UIA9 1087 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MYL3P08590 195 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 LIG3P49916 1009 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SPDYAQ5MJ70 313 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SPOPLQ6IQ16 392 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 C4orf50Q6ZRC1 276 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MTG1Q9BT17 334 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 GRHL1Q9NZI5 618 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MYO5AQ9Y4I1 1855 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 APOA4P06727 396 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PAMP19021 973 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 GABRB2P47870 512 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SOX10P56693 466 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 DYNLT1P63172 113 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 FAM193BQ96PV7 902 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PCSK1NQ9UHG2 260 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TRHDEQ9UKU6 1024 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ZSCAN5CA6NGD5 496 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 NPTXRO95502 500 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 RPL9P32969 192 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SKIV2L2P42285 1042 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 NDST1P52848 882 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ZC3H12AQ5D1E8 599 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 JADE1Q6IE81 842 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CRELD2Q6UXH1 353 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 GPR142Q7Z601 462 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 LINC00523Q86TU6 105 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MCUQ8NE86 351 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ELAC2Q9BQ52 826 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CHST7Q9NS84 486 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 OPHN1O60890 802 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 IFNAR2P48551 515 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SH3BGRP55822 239 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 FCGRTP55899 365 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PDE1BQ01064 536 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SLC26A9Q7LBE3 791 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 OR2W6PQ8NHA6 318 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 UHMK1Q8TAS1 419 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 STMN2Q93045 179 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 WWP1Q9H0M0 922 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 VPS11Q9H270 941 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ACSS3Q9H6R3 686 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 APOBEC3GQ9HC16 384 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 MTO1Q9Y2Z2 717 aaKnown RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 FAM200BP0CF97 657 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CTCFP49711 727 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 ZNF792Q3KQV3 632 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 TTC39BQ5VTQ0 682 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-210ENST00000635776 NAPEPLDQ6IQ20 393 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PALB2Q86YC2 1186 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SLC35B2Q8TB61 432 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 RXFP2Q8WXD0 754 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 APBA2Q99767 749 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 PTPRHQ9HD43 1115 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 HACD3Q9P035 362 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 SORCS3Q9UPU3 1222 aa4.75□□□□□ -1.65
SCN1A-210ENST00000635776 CAND2O75155 1236 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LUC7L3O95232 432 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ALADP13716 330 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 DARSP14868 501 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 HOXB8P17481 243 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PSEN2P49810 448 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PRKAA2P54646 552 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SLC12A2P55011 1212 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TSNAXIP1Q2TAA8 658 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CXorf38Q8TB03 319 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MCUR1Q96AQ8 359 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MAGEB5Q9BZ81 275 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 DHX35Q9H5Z1 703 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 GRID1Q9ULK0 1009 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MAD1L1Q9Y6D9 718 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PRPF4O43172 522 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 SERPINB4P48594 390 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 YWHAZP63104 245 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ARHGAP1Q07960 439 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MFSD10Q14728 455 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PPP6R3Q5H9R7 873 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TAS1R3Q7RTX0 852 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 TRPM8Q7Z2W7 1104 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CRYBG2Q8N1P7 616 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ACMSDQ8TDX5 336 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CKAP2Q8WWK9 683 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 IRGQQ8WZA9 623 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 RNF157Q96PX1 679 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 LRRC37BQ96QE4 947 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 BHMG1C9JSJ3 638 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 PI4K2BG5E9Z4 385 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MICAL2O94851 1124 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ODC1P11926 461 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 CALRP27797 417 aaKnown RBP4.74□□□□□ -1.65
SCN1A-210ENST00000635776 MIPP30301 263 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ASPAP45381 313 aa4.74□□□□□ -1.65
SCN1A-210ENST00000635776 ACTN3Q08043 901 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms