RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 SLC5A3P53794 718 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 MARSP56192 900 aaKnown RBP16.62■□□□□ 0.25
LINC00339-207ENST00000634712 TRIM59Q8IWR1 403 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 DTWD2Q8NBA8 298 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 PRSS33Q8NF86 280 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 OVCA2Q8WZ82 227 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 SMOQ99835 787 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 ARID3AQ99856 593 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
LINC00339-207ENST00000634712 FBXO44Q9H4M3 255 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 C8orf33Q9H7E9 229 aaPredicted RBP16.62■□□□□ 0.25
LINC00339-207ENST00000634712 CSNK1G1Q9HCP0 422 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 LTB4R2Q9NPC1 389 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 GKN1Q9NS71 199 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 CCL26Q9Y258 94 aa16.62■□□□□ 0.25
LINC00339-207ENST00000634712 BEST1O76090 585 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 SLC8A3P57103 927 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 PPP1R26Q5T8A7 1209 aaPredicted RBP16.61■□□□□ 0.25
LINC00339-207ENST00000634712 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 CCDC105Q8IYK2 499 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 PPM1KQ8N3J5 372 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 FAM3CQ92520 227 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 MSANTD3Q96H12 275 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 SLC22A12Q96S37 553 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 OSBPL6Q9BZF3 934 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 GCNT4Q9P109 453 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
LINC00339-207ENST00000634712 GREB1Q4ZG55 1949 aa16.61■□□□□ 0.25
LINC00339-207ENST00000634712 KMT2EQ8IZD2 1858 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 TNFRSF10BO14763 440 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 RAD23BP54727 409 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 MLLT6P55198 1093 aaPredicted RBP16.6■□□□□ 0.25
LINC00339-207ENST00000634712 CLEC20AQ6ZU45 233 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 SLC4A11Q8NBS3 891 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 ZMIZ2Q8NF64 920 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
LINC00339-207ENST00000634712 DUSP16Q9BY84 665 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 GTSE1Q9NYZ3 720 aa16.6■□□□□ 0.25
LINC00339-207ENST00000634712 NDRG2Q9UN36 371 aaKnown RBP16.6■□□□□ 0.25
LINC00339-207ENST00000634712 MTF2Q9Y483 593 aaPredicted RBP16.6■□□□□ 0.25
LINC00339-207ENST00000634712 OBSL1O75147 1896 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 H0Y858 1186 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 ARNTLO00327 626 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 CD19P15391 556 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
LINC00339-207ENST00000634712 PLA2G5P39877 138 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 MTIF2P46199 727 aaKnown RBP16.59■□□□□ 0.25
LINC00339-207ENST00000634712 MTF1Q14872 753 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 ITPRIPL2Q3MIP1 535 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 HECTD3Q5T447 861 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 SH3RF2Q8TEC5 729 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 ATOH1Q92858 354 aaPredicted RBP16.59■□□□□ 0.25
LINC00339-207ENST00000634712 NACA2Q9H009 215 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
LINC00339-207ENST00000634712 IL37Q9NZH6 218 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
LINC00339-207ENST00000634712 WDFY4Q6ZS81 3184 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 MBL2P11226 248 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-207ENST00000634712 ACO1P21399 889 aaKnown RBP16.58■□□□□ 0.24
LINC00339-207ENST00000634712 TARSP26639 723 aaKnown RBP16.58■□□□□ 0.24
LINC00339-207ENST00000634712 MAGEA9P43362 315 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 IFNAR2P48551 515 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 AMPD2Q01433 879 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 TNK2Q07912 1038 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 TCF15Q12870 199 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 RUNX3Q13761 415 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 PDGFRLQ15198 375 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 SGO2Q562F6 1265 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 RALGPS2Q86X27 583 aaPredicted RBP16.58■□□□□ 0.24
LINC00339-207ENST00000634712 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 FAM83CQ9BQN1 747 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 EBF3Q9H4W6 596 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 THAP9Q9H5L6 903 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 PNPLA8Q9NP80 782 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
LINC00339-207ENST00000634712 GMIPQ9P107 970 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 HESX1Q9UBX0 185 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 KIAA1257Q9ULG3 409 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 TICRRQ7Z2Z1 1910 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 ANAPC1Q9H1A4 1944 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 MUC6Q6W4X9 2439 aa16.58■□□□□ 0.24
LINC00339-207ENST00000634712 SPECC1L-ADORA2AF8WAN1 911 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 VDRP11473 427 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 SOX9P48436 509 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 SLC7A9P82251 487 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 NHLH1Q02575 133 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 ZNF77Q15935 545 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 CT47A1Q5JQC4 288 aaPredicted RBP16.57■□□□□ 0.24
LINC00339-207ENST00000634712 ARHGAP17Q68EM7 881 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 TRIM68Q6AZZ1 485 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 TMEM270Q6UE05 265 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 RRAGAQ7L523 313 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms