RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RABGEF1Q9UJ41 708 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 KIAA1257Q9ULG3 409 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ZMYND8Q9ULU4 1186 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 AGAP1Q9UPQ3 857 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 USH1CQ9Y6N9 552 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 CLUHO75153 1309 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ASB14A6NK59 587 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 GOLGA8MH3BSY2 632 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 GPR25O00155 361 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 IGF2BP3O00425 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
GPC3-204ENST00000631057 TYROBPO43914 113 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 SPAG6O75602 509 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 DCTN3O75935 186 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 ITGB3P05106 788 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 GJB1P08034 283 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 CCNB1P14635 433 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 GPD1P21695 349 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 STIP1P31948 543 aaKnown RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 ZNF143P52747 638 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 GDF10P55107 478 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 CDH8P55286 799 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ROR1Q01973 937 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 INCA1Q0VD86 236 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 TMEM132DQ14C87 1099 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 STILQ15468 1287 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 FAM47CQ5HY64 1035 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 KCNT1Q5JUK3 1230 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 FAM102AQ5T9C2 384 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 WLSQ5T9L3 541 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ANKRD22Q5VYY1 191 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ADGRD1Q6QNK2 874 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 PNMA8AQ86V59 439 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 NT5DC4Q86YG4 428 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 PALM2Q8IXS6 379 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 KIAA0319LQ8IZA0 1049 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 C4orf33Q8N1A6 199 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 FITM2Q8N6M3 262 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 EMC1Q8N766 993 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 HSPH1Q92598 858 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 KLHL29Q96CT2 875 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 HPDLQ96IR7 371 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ZNF668Q96K58 619 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 RMDN2Q96LZ7 410 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 DHRS4Q9BTZ2 278 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 CALN1Q9BXU9 219 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 MAK16Q9BXY0 300 aaKnown RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 MINDY3Q9H8M7 445 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 NOD2Q9HC29 1040 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 SAE1Q9UBE0 346 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 TJP2Q9UDY2 1190 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 PCSK1NQ9UHG2 260 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 ITGA11Q9UKX5 1188 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 BARX2Q9UMQ3 279 aaPredicted RBP8.44□□□□□ -1.06
GPC3-204ENST00000631057 PHTF1Q9UMS5 762 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 USP18Q9UMW8 372 aa8.44□□□□□ -1.06
GPC3-204ENST00000631057 MYO18AQ92614 2054 aaKnown RBP8.43□□□□□ -1.06
GPC3-204ENST00000631057 COL1A2P08123 1366 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 CFAP69A5D8W1 941 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 TM9SF1O15321 606 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 PRPSAP2O60256 369 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 EDF1O60869 148 aaKnown RBP8.43□□□□□ -1.06
GPC3-204ENST00000631057 BANF1O75531 89 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 CD48P09326 243 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 RBP3P10745 1247 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 DESP17661 470 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 RPA3P35244 121 aaPredicted RBP8.43□□□□□ -1.06
GPC3-204ENST00000631057 MSH2P43246 934 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 GPD2P43304 727 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 RBP5P82980 135 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 PPIL2Q13356 520 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 ORC1Q13415 861 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 DPYSL3Q14195 570 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 NOMO1Q15155 1222 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 BBS9Q3SYG4 887 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FNBP1LQ5T0N5 605 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FYB2Q5VWT5 728 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 DPY19L2Q6NUT2 758 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 DARS2Q6PI48 645 aaKnown RBP8.43□□□□□ -1.06
GPC3-204ENST00000631057 LCLAT1Q6UWP7 414 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 C3orf62Q6ZUJ4 267 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FAM47EQ6ZV65 393 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 ASRGL1Q7L266 308 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 RPAINQ86UA6 219 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 CDR2LQ86X02 465 aaPredicted RBP8.43□□□□□ -1.06
GPC3-204ENST00000631057 CEP57Q86XR8 500 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 ECHDC2Q86YB7 292 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 MAP7D3Q8IWC1 876 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 UNC45BQ8IWX7 931 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 TMEM192Q8IY95 271 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FAM71DQ8N9W8 422 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 FBXO36Q8NEA4 188 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 CXorf38Q8TB03 319 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 SPATA18Q8TC71 538 aa8.43□□□□□ -1.06
GPC3-204ENST00000631057 COPS5Q92905 334 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms