RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ITFG1	Q8TB96	612 aa		27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	SLC35F5	Q8WV83	523 aa		27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	DDX1	Q92499	740 aa	Known RBP	27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	IL37	Q9NZH6	218 aa		27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	AIPL1	Q9NZN9	384 aa		27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	NOCT	Q9UK39	431 aa	Known RBP	27.46	■■□□□ 1.99
UBE3A-222	ENST00000630907	IL9	P15248	144 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	CDC25C	P30307	473 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	CASP14	P31944	242 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	CCR2	P41597	374 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	TMC6	Q7Z403	805 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	IRF2BP2	Q7Z5L9	587 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	PASD1	Q8IV76	773 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	TCEAL4	Q96EI5	215 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	GCNA	Q96QF7	691 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	LHX5	Q9H2C1	402 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	FBXO44	Q9H4M3	255 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	IL21	Q9HBE4	155 aa		27.45	■■□□□ 1.98
UBE3A-222	ENST00000630907	F11	P03951	625 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	TPM1	P09493	284 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	KIF11	P52732	1056 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	CDR2	Q01850	454 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	PMF1	Q6P1K2	205 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	GAREM2	Q75VX8	874 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	GET4	Q7L5D6	327 aa	Predicted RBP	27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	SHKBP1	Q8TBC3	707 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	SLC20A1	Q8WUM9	679 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	KCTD13	Q8WZ19	329 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	ASB2	Q96Q27	587 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	PHF7	Q9BWX1	381 aa	Predicted RBP	27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	ATXN3L	Q9H3M9	355 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	LRRC4	Q9HBW1	653 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	CEP83	Q9Y592	693 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907	MYH10	P35580	1976 aa		27.44	■■□□□ 1.98
UBE3A-222	ENST00000630907		A0A1W2PRU2	124 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	MOSPD3	O75425	235 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	MME	P08473	750 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	GJA1	P17302	382 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	RGS7	P49802	495 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	TAF10	Q12962	218 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	RAB41	Q5JT25	222 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	SYN2	Q92777	582 aa	Predicted RBP	27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	FBXO32	Q969P5	355 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	HSFY1	Q96LI6	401 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	SLITRK1	Q96PX8	696 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	EYS	Q5T1H1	3165 aa		27.43	■■□□□ 1.98
UBE3A-222	ENST00000630907	DOCK6	Q96HP0	2047 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	FAM92A	A1XBS5	289 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	CHRNB2	P17787	502 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	TKTL1	P51854	596 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	E4F1	Q66K89	784 aa	Predicted RBP	27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	TMEM150A	Q86TG1	271 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	WDTC1	Q8N5D0	677 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	STK32A	Q8WU08	396 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	ING5	Q8WYH8	240 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.42	■■□□□ 1.98	3e-9	■□□□□ 10.5
UBE3A-222	ENST00000630907	TRPM5	Q9NZQ8	1165 aa		27.42	■■□□□ 1.98
UBE3A-222	ENST00000630907	NOTCH4	Q99466	2003 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	NRG2	O14511	850 aa	Predicted RBP	27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	CEBPB	P17676	345 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	GBP2	P32456	591 aa	Predicted RBP	27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	PPP3CC	P48454	512 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	FMO1	Q01740	532 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	TEAD2	Q15562	447 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	OTOP3	Q7RTS5	596 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	TMEM35B	Q8NCS4	154 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	OVCA2	Q8WZ82	227 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	AGPAT1	Q99943	283 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	CYTH4	Q9UIA0	394 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	SCML2	Q9UQR0	700 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	USP3	Q9Y6I4	520 aa		27.41	■■□□□ 1.98
UBE3A-222	ENST00000630907	GOLGA6L3	A6NEY3	463 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	ADCY5	O95622	1261 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	LSM8	O95777	96 aa	Known RBP	27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	PRKCI	P41743	596 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	ACADSB	P45954	432 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	TBX2	Q13207	712 aa	Predicted RBP	27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	ARHGAP15	Q53QZ3	475 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	SIX6OS1	Q8N1H7	587 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	C1orf131	Q8NDD1	294 aa	Known RBP	27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	PDZD8	Q8NEN9	1154 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	MRPS31	Q92665	395 aa	Known RBP	27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	FGF13	Q92913	245 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	NOX5	Q96PH1	765 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	SLC4A5	Q9BY07	1137 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	ST7	Q9NRC1	585 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	CHORDC1	Q9UHD1	332 aa	Predicted RBP	27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	CDH7	Q9ULB5	785 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	UST	Q9Y2C2	406 aa		27.4	■■□□□ 1.98
UBE3A-222	ENST00000630907	GREB1	Q4ZG55	1949 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	TADA3	O75528	432 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	GABBR2	O75899	941 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	BMP1	P13497	986 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	LCP1	P13796	627 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	CDH5	P33151	784 aa	Predicted RBP	27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	RPL34	P49207	117 aa	Known RBP	27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	CYP4F8	P98187	520 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	KLHL30	Q0D2K2	578 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	ADIG	Q0VDE8	80 aa		27.39	■■□□□ 1.98
UBE3A-222	ENST00000630907	PDCL	Q13371	301 aa		27.39	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms