RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 KRT17Q04695 432 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 ZNF252P-AS1Q0IIN9 211 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 RPS6KA1Q15418 735 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 SGO2Q562F6 1265 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 KIAA0319Q5VV43 1072 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 LCLAT1Q6UWP7 414 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 UNC93AQ86WB7 457 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 TTC30AQ86WT1 665 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 NOA1Q8NC60 698 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 APPL2Q8NEU8 664 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 RSPH1Q8WYR4 309 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 SUSD6Q92537 303 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 ALG3Q92685 438 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 DNAI2Q9GZS0 605 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 TSPAN16Q9UKR8 245 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 AMFRQ9UKV5 643 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 KIAA1671Q9BY89 1806 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 EFCAB8A8MWE9 144 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 TULP2O00295 520 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 PODXLO00592 558 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 GLP2RO95838 553 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 EOMESO95936 686 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 RPL9P32969 192 aaKnown RBP10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 PPM1AP35813 382 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 RPL7AP62424 266 aaKnown RBP10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 CKAP4Q07065 602 aaKnown RBP10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 GRIK3Q13003 919 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 MESDQ14696 234 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 STILQ15468 1287 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 ELF2Q15723 593 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 CYP4A22Q5TCH4 519 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 WSCD1Q658N2 575 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 DPH6Q7L8W6 267 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 CRYBG2Q8N1P7 616 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 TOP6BLQ8N6T0 577 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 COLGALT1Q8NBJ5 622 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 OR6B3Q8NGW1 331 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 KRT35Q92764 455 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 EPC1Q9H2F5 836 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 FAM49BQ9NUQ9 324 aa10.02□□□□□ -0.8
PDLIM5-223ENST00000627587 A8MXQ7 604 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 CYB561D2O14569 222 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 DYNC1I1O14576 645 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ATP2C2O75185 946 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 DDHD2O94830 711 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 CSPG5O95196 566 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ERBB2P04626 1255 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 CALB1P05937 261 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 PDGFRBP09619 1106 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 COMTP21964 271 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 WARSP23381 471 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 TKTP29401 623 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 GABRB2P47870 512 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 PEX5P50542 639 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 GSCP56915 257 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 OGDHQ02218 1023 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 DSC1Q08554 894 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 PDCLQ13371 301 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ANKRD54Q6NXT1 300 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ADGRF2Q8IZF7 708 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 MSANTD4Q8NCY6 345 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 UBA3Q8TBC4 463 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 RPGRIP1Q96KN7 1286 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 SENP8Q96LD8 212 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 SNX25Q9H3E2 840 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 MRPL47Q9HD33 250 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 INPP5FQ9Y2H2 1132 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 NR2E1Q9Y466 385 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 SCINQ9Y6U3 715 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.81
PDLIM5-223ENST00000627587 PATJQ8NI35 1801 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CTAGE15A4D2H0 777 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 TMEM110-MUSTN1A8MSY1 372 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 I3L4J1 428 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 M0QYV0 167 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CES2O00748 559 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 KCNK3O14649 394 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 PER2O15055 1255 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 FAM163BP0C2L3 166 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CTAGE8P0CG41 777 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CCDC130P13994 396 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 GNL1P36915 607 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 GATMP50440 423 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 ERVFC1P60507 584 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 TUSC3Q13454 348 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 GOLGA7BQ2TAP0 167 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CCDC181Q5TID7 509 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 ARHGAP17Q68EM7 881 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 GLB1LQ6UWU2 654 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 PAQR9Q6ZVX9 377 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CTAGE6Q86UF2 777 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 ERICH1Q86X53 443 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 XYLT1Q86Y38 959 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 CTAGE4Q8IX94 777 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 PRSS33Q8NF86 280 aa10.01□□□□□ -0.81
PDLIM5-223ENST00000627587 SLC35F5Q8WV83 523 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms