RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MCRS1Q96EZ8 462 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 HPDLQ96IR7 371 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 SEPT5Q99719 369 aaPredicted RBP6.86□□□□□ -1.31
TCF4-249ENST00000625716 PRRX2Q99811 253 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
TCF4-249ENST00000625716 ZCWPW1Q9H0M4 648 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 KCNH6Q9H252 994 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 DUSP12Q9UNI6 340 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 FRMD4BQ9Y2L6 1034 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 YIPF1Q9Y548 306 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 ASB3Q9Y575 518 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 PCDHB5Q9Y5E4 795 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 SNX9Q9Y5X1 595 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 NUMBLQ9Y6R0 609 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 CITO14578 2027 aa6.86□□□□□ -1.31
TCF4-249ENST00000625716 REV3LO60673 3130 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 PLXNA3P51805 1871 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 MTMR11A4FU01 709 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 ANHXE9PGG2 379 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 KLRC4O43908 158 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SMC2O95347 1197 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 FGF19O95750 216 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SRFP11831 508 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 RPL13P26373 211 aaKnown RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 PCSK1P29120 753 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 ARSDP51689 593 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 TNNC1P63316 161 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 BIRC3Q13489 604 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 HTR4Q13639 388 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 PSMD6Q15008 389 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 NFE2Q16621 373 aaPredicted RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 ARHGAP15Q53QZ3 475 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 PRSS36Q5K4E3 855 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 CENPPQ6IPU0 288 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 PARM1Q6UWI2 310 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 DPH6Q7L8W6 267 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 TRAPPC11Q7Z392 1133 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 FAM35AQ86V20 835 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SPATA2LQ8IUW3 424 aaPredicted RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 ADGRF2Q8IZF7 708 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 PDCL2Q8N4E4 241 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 ATAD1Q8NBU5 361 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 FLCNQ8NFG4 579 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 OR5B17Q8NGF7 314 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 OR10T2Q8NGX3 314 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SPATA18Q8TC71 538 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SPPL2BQ8TCT7 592 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 ASIC4Q96FT7 647 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 BORCS6Q96GS4 357 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 GCNAQ96QF7 691 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 TMEM209Q96SK2 561 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 CGRRF1Q99675 332 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 ACBD6Q9BR61 282 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 GPR88Q9GZN0 384 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SNX25Q9H3E2 840 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SMOC2Q9H3U7 446 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 GOLPH3LQ9H4A5 285 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 SLITRK6Q9H5Y7 841 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 RMND1Q9NWS8 449 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 GDAP2Q9NXN4 497 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 DDX43Q9NXZ2 648 aaKnown RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
TCF4-249ENST00000625716 CEP72Q9P209 647 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 HSFX1Q9UBD0 423 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 WNT16Q9UBV4 365 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 RAPGEFL1Q9UHV5 662 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 L1RE1Q9UN81 338 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 A0A0C4DFX4 3053 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 VCANP13611 3396 aa6.85□□□□□ -1.31
TCF4-249ENST00000625716 NARSO43776 548 aaKnown RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 ECI2O75521 394 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 NR3C1P04150 777 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 KRT13P13646 458 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 P4HA1P13674 534 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 CEBPBP17676 345 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 TRIM21P19474 475 aaKnown RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 AVPR2P30518 371 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 ATICP31939 592 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 CDR1P51861 262 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 RPL10AP62906 217 aaKnown RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 RAC1P63000 192 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 PFKPQ01813 784 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 FAM160A1Q05DH4 1040 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 KCNB1Q14721 858 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 MAPRE1Q15691 268 aaKnown RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 SLC5A9Q2M3M2 681 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 WDR72Q3MJ13 1102 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 C4orf50Q6ZRC1 276 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 DNAJB7Q7Z6W7 309 aaPredicted RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 KIAA0895Q8NCT3 520 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 ST13P5Q8NFI4 369 aaPredicted RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 FGF14Q92915 247 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 SYAP1Q96A49 352 aaPredicted RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 E2F7Q96AV8 911 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 SHDQ96IW2 340 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms