RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 CEP295NLQ96MC4 621 aa17.27■□□□□ 0.36
CD99-211ENST00000623253 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.36
CD99-211ENST00000623253 ZDHHC4Q9NPG8 344 aa17.27■□□□□ 0.36
CD99-211ENST00000623253 FRMD3A2A2Y4 597 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 CDX4O14627 284 aaPredicted RBP17.26■□□□□ 0.35
CD99-211ENST00000623253 KIAA0391O15091 583 aaKnown RBP17.26■□□□□ 0.35
CD99-211ENST00000623253 KAT7O95251 611 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 APODP05090 189 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 MBL2P11226 248 aaPredicted RBP17.26■□□□□ 0.35
CD99-211ENST00000623253 CEACAM1P13688 526 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 HNRNPLP14866 589 aaKnown RBP eCLIP17.26■□□□□ 0.352e-8■■■■■ 41.8
CD99-211ENST00000623253 MAPK8P45983 427 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 PPP3CCP48454 512 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 KDSRQ06136 332 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 TAF10Q12962 218 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 RESTQ13127 1097 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 EMC10Q5UCC4 262 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 LIMS2Q7Z4I7 341 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 PDILTQ8N807 584 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 FRMD1Q8N878 549 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 RDH13Q8NBN7 331 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 DEFB124Q8NES8 71 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 HPS3Q969F9 1004 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 SPACA7Q96KW9 195 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 POLMQ9NP87 494 aaPredicted RBP17.26■□□□□ 0.35
CD99-211ENST00000623253 ARHGEF4Q9NR80 690 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 ZMIZ1Q9ULJ6 1067 aa17.26■□□□□ 0.35
CD99-211ENST00000623253 SGK1O00141 431 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 TOP3BO95985 862 aaKnown RBP17.25■□□□□ 0.35
CD99-211ENST00000623253 DLATP10515 647 aaKnown RBP17.25■□□□□ 0.35
CD99-211ENST00000623253 TNNI1P19237 187 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 CSRP1P21291 193 aaKnown RBP17.25■□□□□ 0.35
CD99-211ENST00000623253 NOP14P78316 857 aaKnown RBP17.25■□□□□ 0.35
CD99-211ENST00000623253 MESP2Q0VG99 397 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 TRIM61Q5EBN2 209 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 RHBDF2Q6PJF5 856 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 TRAPPC11Q7Z392 1133 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 WDR49Q8IV35 697 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 IL17RCQ8NAC3 791 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 GLIS3Q8NEA6 775 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 WHAMMQ8TF30 809 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 HMGB4Q8WW32 186 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 C8orf48Q96LL4 319 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 TTLL2Q9BWV7 592 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 HSPBP1Q9NZL4 362 aa17.25■□□□□ 0.35
CD99-211ENST00000623253 CFAP47Q6ZTR5 3102 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 A0A087X0B3 334 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 ADH1CP00326 375 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 CST3P01034 146 aaPredicted RBP17.24■□□□□ 0.35
CD99-211ENST00000623253 ADH5P11766 374 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 PTPN1P18031 435 aaKnown RBP17.24■□□□□ 0.35
CD99-211ENST00000623253 PTGER3P43115 390 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 TNNC1P63316 161 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 LMAN2Q12907 356 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 EOGTQ5NDL2 527 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 OLIG1Q8TAK6 271 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 CCDC127Q96BQ5 260 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 FNBP1Q96RU3 617 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 NUSAP1Q9BXS6 441 aaKnown RBP17.24■□□□□ 0.35
CD99-211ENST00000623253 ZNF518BQ9C0D4 1074 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 DPEP3Q9H4B8 488 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 KIAA1586Q9HCI6 787 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
CD99-211ENST00000623253 TCRBV21S2A2A0A5A6 115 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 A8MXQ7 604 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 CLDN5O00501 218 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 CLSTN1O94985 981 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 OLFM2O95897 454 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 OAS1P00973 400 aaKnown RBP17.23■□□□□ 0.35
CD99-211ENST00000623253 P2RY2P41231 377 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 GRIA2P42262 883 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 CACNA2D1P54289 1103 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 BYSLQ13895 437 aaKnown RBP17.23■□□□□ 0.35
CD99-211ENST00000623253 WDR72Q3MJ13 1102 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 KIAA1211LQ6NV74 962 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 DDX42Q86XP3 938 aaKnown RBP eCLIP17.23■□□□□ 0.35
CD99-211ENST00000623253 NAT16Q8N8M0 369 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 SCNM1Q9BWG6 230 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 ADAM33Q9BZ11 813 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 ELOVL4Q9GZR5 314 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 TMEM74BQ9NUR3 256 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 TBC1D14Q9P2M4 693 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 NXF1Q9UBU9 619 aaKnown RBP17.23■□□□□ 0.35
CD99-211ENST00000623253 NME7Q9Y5B8 376 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 KIAA1549LQ6ZVL6 1849 aa17.23■□□□□ 0.35
CD99-211ENST00000623253 ATXN2Q99700 1313 aaKnown RBP17.22■□□□□ 0.35
CD99-211ENST00000623253 LAMA1P25391 3075 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 ANAPC1Q9H1A4 1944 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.22■□□□□ 0.35
CD99-211ENST00000623253 TNFRSF10BO14763 440 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 TACC1O75410 805 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 CFIP05156 583 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 YWHAQP27348 245 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 EIF2DP41214 584 aaKnown RBP17.22■□□□□ 0.35
CD99-211ENST00000623253 TNFRSF4P43489 277 aa17.22■□□□□ 0.35
CD99-211ENST00000623253 CYP2J2P51589 502 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms