RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 VN1R3Q9BXE9 311 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 CNGB3Q9NQW8 809 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 TMEM59LQ9UK28 342 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 TMEM110-MUSTN1A8MSY1 372 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 SART1O43290 800 aaKnown RBP14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 NCK2O43639 380 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 TLL1O43897 1013 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 OR4Q2P0C623 313 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 LINC00271P0C7V0 271 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 LCP1P13796 627 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 CPB1P15086 417 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 GLUD2P49448 558 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 PSMD5Q16401 504 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 SCML4Q8N228 414 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 UBL4BQ8N7F7 174 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 RIN2Q8WYP3 895 aaPredicted RBP14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 CD101Q93033 1021 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 PBKQ96KB5 322 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 ASNSD1Q9NWL6 643 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 RNF14Q9UBS8 474 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 RWDD3Q9Y3V2 267 aa14.95□□□□□ -0.02
CLTCL1-212ENST00000622493 HHLA1C9JL84 531 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 PIK3R2O00459 728 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 TRIM66O15016 1216 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 GJB6O95452 261 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 GLI1P08151 1106 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 DESP17661 470 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 CTNNA2P26232 953 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 GRIK1P39086 918 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 TKTL1P51854 596 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 CACNA2D1P54289 1103 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 MRPS5P82675 430 aaKnown RBP14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 ADIGQ0VDE8 80 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 FBXO22Q8NEZ5 403 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 JOSD2Q8TAC2 188 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 C8orf48Q96LL4 319 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 TMEM30AQ9NV96 361 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 ABI2Q9NYB9 513 aaPredicted RBP14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 SSX2IPQ9Y2D8 614 aa14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.94□□□□□ -0.02
CLTCL1-212ENST00000622493 C2CD4BA6NLJ0 364 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 F8VP50 259 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 KCNK3O14649 394 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 URODP06132 367 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 GPD1P21695 349 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 CYP2F1P24903 491 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 PSMA2P25787 234 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 ZNF143P52747 638 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 RSPO2Q6UXX9 243 aaPredicted RBP14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 KHSRPQ92945 711 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 NCAPGQ9BPX3 1015 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 RHOBTB2Q9BYZ6 727 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 CARD9Q9H257 536 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 PCDHA3Q9Y5H8 950 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 CDY1Q9Y6F8 540 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 KIAA1671Q9BY89 1806 aa14.93□□□□□ -0.02
CLTCL1-212ENST00000622493 MTMR11A4FU01 709 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 DDX3YO15523 660 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 HSF2BPO75031 334 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 SRGAP2O75044 1071 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 RNF8O76064 485 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 FGF18O76093 207 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PDGFRAP16234 1089 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 OGDHQ02218 1023 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CREMQ03060 361 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 ADCY1Q08828 1119 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 ZNF252P-AS1Q0IIN9 211 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PM20D1Q6GTS8 502 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 RHOT1Q8IXI2 618 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 VPS52Q8N1B4 723 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 EMC1Q8N766 993 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CEP112Q8N8E3 955 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 IRGQQ8WZA9 623 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PIWIL1Q96J94 861 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CEP295NLQ96MC4 621 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CNPY3Q9BT09 278 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 HSFX1Q9UBD0 423 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 USP3Q9Y6I4 520 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 DPYSL4O14531 572 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 ZBED1O96006 694 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PEX5P50542 639 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 ARPP19P56211 112 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 YWHAZP63104 245 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CKAP4Q07065 602 aaKnown RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 DMTNQ08495 405 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 PTPROQ16827 1216 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 LRRC38Q5VT99 294 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 TPGS2Q68CL5 300 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CREG2Q8IUH2 290 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 CLEC4CQ8WTT0 213 aa14.92□□□□□ -0.02
CLTCL1-212ENST00000622493 COG1Q8WTW3 980 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms