RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NCAM2O15394 837 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 USP1O94782 785 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 ACTL6BO94805 426 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 SRGAP2BP0DMP2 458 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 HGFP14210 728 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 CST5P28325 142 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 UQCRC1P31930 480 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 ALDH18A1P54886 795 aaKnown RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 PRKD1Q15139 912 aaPredicted RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 TIGD6Q17RP2 521 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 SPPL3Q8TCT6 385 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 ABHD5Q8WTS1 349 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 TMEM171Q8WVE6 324 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 FAM136AQ96C01 138 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 GRAMD1AQ96CP6 724 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 DDX23Q9BUQ8 820 aaKnown RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 AMBRA1Q9C0C7 1298 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 PABPC3Q9H361 631 aaKnown RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 UNKLQ9H9P5 680 aaKnown RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 MLXIPQ9HAP2 919 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 PRDM8Q9NQV8 689 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 SRP68Q9UHB9 627 aaKnown RBP5.71□□□□□ -1.5
CPNE3-213ENST00000622183 MAP3K2Q9Y2U5 619 aa5.71□□□□□ -1.5
CPNE3-213ENST00000622183 ADM5C9JUS6 153 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 EIF3FO00303 357 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-213ENST00000622183 DHHO43323 396 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 FAM155BO75949 473 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 CDKL5O76039 1030 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 GATA3P23771 443 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 DDX6P26196 483 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPNE3-213ENST00000622183 EPHA3P29320 983 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 BMPR1AP36894 532 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 GATMP50440 423 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 RESTQ13127 1097 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 MOGAT3Q86VF5 341 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 SLC44A2Q8IWA5 706 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-213ENST00000622183 NRSN1Q8IZ57 195 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 ABRAQ8N0Z2 381 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 TTC9BQ8N6N2 239 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 TEX19Q8NA77 164 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 IL17REQ8NFR9 667 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 OSCP1Q8WVF1 389 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 ATG4AQ8WYN0 398 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 HIST1H2AAQ96QV6 131 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 NUDT22Q9BRQ3 303 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 RTKNQ9BST9 563 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 PDP2Q9P2J9 529 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 LPAR3Q9UBY5 353 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 SNX14Q9Y5W7 946 aa5.7□□□□□ -1.5
CPNE3-213ENST00000622183 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 A0A0G2JLL6 359 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 DNPH1O43598 174 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 SNX2O60749 519 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 FAM20BO75063 409 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 NDUFA10O95299 355 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ANXA6P08133 673 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 RBL1P28749 1068 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ADORA2AP29274 412 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 NTSR1P30989 418 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ADD2P35612 726 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 AP2B1P63010 937 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 R3HDM1Q15032 1099 aaKnown RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ADCK5Q3MIX3 580 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 DEPDC1Q5TB30 811 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ATPAF1Q5TC12 328 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 CCDC117Q8IWD4 279 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 CPEB3Q8NE35 698 aaKnown RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 THAP4Q8WY91 577 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 RUBCNQ92622 972 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 USP13Q92995 863 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 LOXL4Q96JB6 756 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ZBTB45Q96K62 511 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 WDR24Q96S15 920 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ADAM2Q99965 735 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ACTRT3Q9BYD9 372 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 INO80BQ9C086 356 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 EPS8L2Q9H6S3 715 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ZNF703Q9H7S9 590 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 KIF17Q9P2E2 1029 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 DKK2Q9UBU2 259 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
CPNE3-213ENST00000622183 CNOT11Q9UKZ1 510 aaKnown RBP5.69□□□□□ -1.5
CPNE3-213ENST00000622183 COL15A1P39059 1388 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 HMX3A6NHT5 357 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 J3KTA2 159 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 AGPSO00116 658 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 ZSCAN9O15535 394 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-213ENST00000622183 GYS1P13807 737 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 ZFP36P26651 326 aaKnown RBP5.68□□□□□ -1.5
CPNE3-213ENST00000622183 HTR7P34969 479 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 SCAPQ12770 1279 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 FHL3Q13643 280 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 EFR3AQ14156 821 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 CLCA4Q14CN2 919 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 TAF12Q16514 161 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 TRIM60Q495X7 471 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 ZNF585AQ6P3V2 769 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
CPNE3-213ENST00000622183 ZNF276Q8N554 614 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms