RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TDRD10Q5VZ19 366 aaKnown RBP12.21□□□□□ -0.45
CPNE3-210ENST00000621245 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 OSCP1Q8WVF1 389 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 RNF38Q9H0F5 515 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 ECT2Q9H8V3 914 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 DUS2Q9NX74 493 aaKnown RBP12.21□□□□□ -0.45
CPNE3-210ENST00000621245 HMGXB4Q9UGU5 601 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 GMEB2Q9UKD1 530 aa12.21□□□□□ -0.45
CPNE3-210ENST00000621245 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.46
CPNE3-210ENST00000621245 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 PLXND1Q9Y4D7 1925 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 RCCD1A6NED2 376 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 USP17L7P0C7H9 530 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 GRIK1P39086 918 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 PGFP49763 221 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 IFRD2Q12894 506 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-210ENST00000621245 STK4Q13043 487 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 PPP2R5DQ14738 602 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 SURF1Q15526 300 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 C1orf228Q6PIY5 440 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 C4orf50Q6ZRC1 276 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 DPH6Q7L8W6 267 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-210ENST00000621245 KBTBD6Q86V97 674 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 RPLP0P6Q8NHW5 317 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 SPATA17Q96L03 361 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 TTLL2Q9BWV7 592 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 RXFP3Q9NSD7 469 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 SMPD4Q9NXE4 827 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-210ENST00000621245 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
CPNE3-210ENST00000621245 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
CPNE3-210ENST00000621245 ZZEF1O43149 2961 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 ZNF840PA6NDX5 716 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 LEFTY2O00292 366 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 DCLK1O15075 740 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 TACC1O75410 805 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 RETP07949 1114 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 PTPN1P18031 435 aaKnown RBP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 GNL1P36915 607 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 OPRD1P41143 372 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 IFNAR2P48551 515 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 AMPD3Q01432 767 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 LMNB2Q03252 620 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 SF3A2Q15428 464 aaKnown RBP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 KNOP1Q1ED39 458 aaKnown RBP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 C1orf220Q5T0J3 134 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 CC2D1AQ6P1N0 951 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 C12orf56Q8IXR9 622 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 CPA6Q8N4T0 437 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 B3GALNT2Q8NCR0 500 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 WBP2Q969T9 261 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 P2RY13Q9BPV8 354 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 SNX25Q9H3E2 840 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 KCTD10Q9H3F6 313 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 KIAA1586Q9HCI6 787 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPNE3-210ENST00000621245 SEMA4GQ9NTN9 838 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 ZMYM5Q9UJ78 669 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 RAB23Q9ULC3 237 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 ARHGAP26Q9UNA1 814 aa12.19□□□□□ -0.46
CPNE3-210ENST00000621245 ADAMTS9Q9P2N4 1935 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 A0A1B0GVL5 298 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 SOBPA7XYQ1 873 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 AXIN1O15169 862 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 OLFM2O95897 454 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 OAS1P00973 400 aaKnown RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 C4BPAP04003 597 aaKnown RBP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 CYP17A1P05093 508 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 HNRNPLP14866 589 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPNE3-210ENST00000621245 PFKFB1P16118 471 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 HDCP19113 662 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 HOXA6P31267 233 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 SEC13P55735 322 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 TNNC1P63316 161 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 TAF10Q12962 218 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 KCNB1Q14721 858 aa12.18□□□□□ -0.46
CPNE3-210ENST00000621245 KMT5BQ4FZB7 885 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms