RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 HOXC8P31273 242 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 HPDP32754 393 aaPredicted RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 ATP1A2P50993 1020 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 MTMR3Q13615 1198 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 MICALL1Q8N3F8 863 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 FAM172AQ8WUF8 416 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 SENP8Q96LD8 212 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 MGEA5O60502 916 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 NEBLO76041 1014 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ZSCAN5DPP0CG00 497 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ETS1P14921 441 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 PMS2P54278 862 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 BCAT1P54687 386 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 SNX16P57768 344 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 BST2Q10589 180 aaKnown RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 BYSLQ13895 437 aaKnown RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 KRT71Q3SY84 523 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 PPP6R3Q5H9R7 873 aaPredicted RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 DENND2CQ68D51 928 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ARFGAP1Q8N6T3 406 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 C12orf50Q8NA57 414 aaPredicted RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 B3GALNT2Q8NCR0 500 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.41□□□□□ -0.74
VTA1-205ENST00000620996 PAAF1Q9BRP4 392 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 HOMER3Q9NSC5 361 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 GRHL1Q9NZI5 618 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ANAPC5Q9UJX4 755 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 hCG_1818297A0A087WSY0 165 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 B3GAT3O94766 335 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 INHAP05111 366 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ZNF143P52747 638 aaPredicted RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 ITGA8P53708 1063 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 SLC6A3Q01959 620 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 SLC25A11Q02978 314 aaKnown RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 UAP1Q16222 522 aaPredicted RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 FAM182AQ5T1J6 154 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 ZDHHC24Q6UX98 284 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 SNF8Q96H20 258 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 PPP1R10Q96QC0 940 aaKnown RBP10.41□□□□□ -0.74
VTA1-205ENST00000620996 CNPY3Q9BT09 278 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 RABEP2Q9H5N1 569 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 RSAD1Q9HA92 442 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 CCDC189A1A4V9 331 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 PAPSS1O43252 624 aaPredicted RBP10.4□□□□□ -0.74
VTA1-205ENST00000620996 MAP3K6O95382 1288 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 TKTP29401 623 aaKnown RBP10.4□□□□□ -0.74
VTA1-205ENST00000620996 KLF1Q13351 362 aaPredicted RBP10.4□□□□□ -0.74
VTA1-205ENST00000620996 LPIN1Q14693 890 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 CCNG2Q16589 344 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 TTMPQ5BVD1 217 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 LRRC38Q5VT99 294 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 LEKR1Q6ZMV7 388 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 AGMOQ6ZNB7 445 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 NIPA2Q8N8Q9 360 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 PWWP2AQ96N64 755 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 TMEM121Q9BTD3 319 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 STARD7Q9NQZ5 370 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 ACSL3O95573 720 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 TRUB2O95900 331 aaKnown RBP10.4□□□□□ -0.74
VTA1-205ENST00000620996 KDELR1P24390 212 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 CDKN2BP42772 138 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 GABRB2P47870 512 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 MAP3K7CLP57077 242 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 ADIGQ0VDE8 80 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 IFRD2Q12894 506 aaPredicted RBP10.4□□□□□ -0.74
VTA1-205ENST00000620996 P3H1Q32P28 736 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 TRNP1Q6NT89 227 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 MREGQ8N565 214 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 ANKRD52Q8NB46 1076 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 LRRC4Q9HBW1 653 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 CHST12Q9NRB3 414 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 ZDHHC18Q9NUE0 388 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 GDAP2Q9NXN4 497 aa10.4□□□□□ -0.74
VTA1-205ENST00000620996 C2CD4BA6NLJ0 364 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 LIASO43766 372 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 PTPN1P18031 435 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 GBP1P32455 592 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SLCO1A2P46721 670 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ARSEP51690 589 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 OTUD4Q01804 1114 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 HP1BP3Q5SSJ5 553 aaPredicted RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 NAIF1Q69YI7 327 aaPredicted RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 OLFML1Q6UWY5 402 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ZC3H18Q86VM9 953 aaKnown RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 IQCKQ8N0W5 287 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SIX6OS1Q8N1H7 587 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ZNF513Q8N8E2 541 aaPredicted RBP10.39□□□□□ -0.75
VTA1-205ENST00000620996 CCDC89Q8N998 374 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 ACTL9Q8TC94 416 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 SLC35F5Q8WV83 523 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 PEBP4Q96S96 227 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 KRT82Q9NSB4 513 aa10.39□□□□□ -0.75
VTA1-205ENST00000620996 H0YHG0 523 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms