RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PPP2R3CQ969Q6 453 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 CIPCQ9C0C6 399 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 GPATCH2LQ9NWQ4 482 aa8.63□□□□□ -1.03
PTPDC1-204ENST00000620992 GNGT2O14610 69 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 DDHD2O94830 711 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 UBOX5O94941 541 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 RALAP11233 206 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ADSSP30520 456 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 HSD17B4P51659 736 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ARSEP51690 589 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 HADHBP55084 474 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 STX1BP61266 288 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 GTF2BQ00403 316 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 DEUP1Q05D60 604 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 FASTKD1Q53R41 847 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 YIPF2Q9BWQ6 316 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 NT5C1AQ9BXI3 368 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 VCX3BQ9H321 246 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 PLEKHA5Q9HAU0 1116 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ASAP2O43150 1006 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 NOL3O60936 208 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CYP1A2P05177 515 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ALDH1A3P47895 512 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 EIF3EP60228 445 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 RAD51Q06609 339 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 KIF19Q2TAC6 998 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 PBXIP1Q96AQ6 731 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 SGF29Q96ES7 293 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ZBTB45Q96K62 511 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 STRA6Q9BX79 667 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 EIF4E1BA6NMX2 242 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 NPM3O75607 178 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 GJB1P08034 283 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CXCL8P10145 99 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CDH8P55286 799 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM131BQ86XD5 332 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 HELQQ8TDG4 1101 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 EDEM1Q92611 657 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 KLHL29Q96CT2 875 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 XPNPEP3Q9NQH7 507 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 R3HDM2Q9Y2K5 976 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 USP15Q9Y4E8 981 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 GJB6O95452 261 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 HSPA4LO95757 839 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ELNP15502 786 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ITIH2P19823 946 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CPT1AP50416 773 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 NOTUMQ6P988 496 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 IPMKQ8NFU5 416 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 RFWD2Q8NHY2 731 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CD101Q93033 1021 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 RBM41Q96IZ5 413 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 FAM81BQ96LP2 452 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 RPRD1AQ96P16 312 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 TGS1Q96RS0 853 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 SLC7A5P2Q9GIP4 190 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CXorf56Q9H5V9 222 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 NOD2Q9HC29 1040 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 CAPN10Q9HC96 672 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ENTPD7Q9NQZ7 604 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 PPARGC1AQ9UBK2 798 aaKnown RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 PNMA8BQ9ULN7 279 aaPredicted RBP8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 SH3BP1Q9Y3L3 701 aa8.62□□□□□ -1.03
PTPDC1-204ENST00000620992 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 H0Y3Z8 333 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 DHX15O43143 795 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TYK2P29597 1187 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ABCD1P33897 745 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ST8SIA6P61647 398 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ELF3P78545 371 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ITIH4Q14624 930 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TMEM161BQ8NDZ6 487 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ROPN1BQ9BZX4 212 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 LRRC19Q9H756 370 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ECT2Q9H8V3 914 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ROPN1Q9HAT0 212 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 DOLKQ9UPQ8 538 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 O00370 1275 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 COPEO14579 308 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SNX3O60493 162 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 AP1G2O75843 785 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 TTC4O95801 387 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 CYBBP04839 570 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 SLC8A1P32418 973 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ATXN3P54252 364 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 ARL4CP56559 192 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 XRCC4Q13426 336 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 LACTB2Q53H82 288 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 IZUMO3Q5VZ72 239 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 RHOT1Q8IXI2 618 aa8.61□□□□□ -1.03
PTPDC1-204ENST00000620992 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms