RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CACNA2D1P54289 1103 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SMAD3P84022 425 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MLLT1Q03111 559 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 DUSP4Q13115 394 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 CAMK1Q14012 370 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SMC1AQ14683 1233 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PTPN20Q4JDL3 420 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ARHGAP29Q52LW3 1261 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 C2CD6Q53TS8 623 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RAB41Q5JT25 222 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 DMRTA1Q5VZB9 504 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PLEKHA7Q6IQ23 1121 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 C17orf53Q8N3J3 647 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RNF10Q8N5U6 811 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SLC35G2Q8TBE7 412 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MICAL1Q8TDZ2 1067 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 IPO4Q8TEX9 1081 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ARHGEF26Q96DR7 871 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MCRS1Q96EZ8 462 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 CALR3Q96L12 384 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PGLYRP2Q96PD5 576 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 KLHL5Q96PQ7 755 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TCF25Q9BQ70 676 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 C11orf70Q9BRQ4 267 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 EMILIN2Q9BXX0 1053 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 RHOBTB2Q9BYZ6 727 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SYNCQ9H7C4 482 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SLC28A3Q9HAS3 691 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PNPLA8Q9NP80 782 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 DMAP1Q9NPF5 467 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TLR9Q9NR96 1032 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ST7Q9NRC1 585 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TMEM30AQ9NV96 361 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 HSFX1Q9UBD0 423 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 CNOT8Q9UFF9 292 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 MTUS1Q9ULD2 1270 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 STRIP2Q9ULQ0 834 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 SLC27A5Q9Y2P5 690 aa8.46□□□□□ -1.06
CPNE3-209ENST00000620393 PDCD11Q14690 1871 aaKnown RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 FNDC1Q4ZHG4 1894 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-209ENST00000620393 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 FAM170AA1A519 330 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 SIGLEC16A6NMB1 481 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 E5RJQ4 531 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 F8VP50 259 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TNFRSF10BO14763 440 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TRIM66O15016 1216 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 PAPSS1O43252 624 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 LPXNO60711 386 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 MTA2O94776 668 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 ERBB2P04626 1255 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 NDUFV1P49821 464 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 GSCP56915 257 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 RPL10AP62906 217 aaKnown RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 ADCY1Q08828 1119 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 MAMLD1Q13495 774 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 OR6B2Q6IFH4 312 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 LILRA6Q6PI73 481 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 PHLDB2Q86SQ0 1253 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 XYLT1Q86Y38 959 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 ZDHHC17Q8IUH5 632 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 SCN4BQ8IWT1 228 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 SCUBE3Q8IX30 993 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 RHOT2Q8IXI1 618 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 FEZF2Q8TBJ5 459 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 RFFLQ8WZ73 363 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TIFAQ96CG3 184 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF653Q96CK0 615 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 SPATA17Q96L03 361 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 CEP295NLQ96MC4 621 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 LMAN2LQ9H0V9 348 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 CRISPLD1Q9H336 500 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 LRRC4Q9HBW1 653 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 MRPL47Q9HD33 250 aaKnown RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 LZTFL1Q9NQ48 299 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 ENTPD7Q9NQZ7 604 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 PARVAQ9NVD7 372 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 IL37Q9NZH6 218 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 UVRAGQ9P2Y5 699 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 MYO1AQ9UBC5 1043 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TJP2Q9UDY2 1190 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TRIM10Q9UDY6 481 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 CHORDC1Q9UHD1 332 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-209ENST00000620393 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 GUCA1BQ9UMX6 200 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 PAXBP1Q9Y5B6 917 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 USP3Q9Y6I4 520 aa8.45□□□□□ -1.06
CPNE3-209ENST00000620393 TDRD15B5MCY1 1934 aaKnown RBP8.44□□□□□ -1.06
CPNE3-209ENST00000620393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.44□□□□□ -1.06
CPNE3-209ENST00000620393 A0A1W2PPC1 479 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 TMEM191CA6NGB0 347 aa8.44□□□□□ -1.06
CPNE3-209ENST00000620393 HIDE1A8MVS5 230 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms