RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 IGKV6D-41A0A0C4DH26 115 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 TMEM63AO94886 807 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 SETSIPP0DME0 302 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 IL1R1P14778 569 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 PMLP29590 882 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 CUL2Q13617 745 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 VWA5B1Q5TIE3 1220 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 APOBEC3HQ6NTF7 200 aaKnown RBP13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 DHDDSQ86SQ9 333 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 ZNF606Q8WXB4 792 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 ATP2A3Q93084 1043 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 COA1Q9GZY4 146 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 KCND2Q9NZV8 630 aa13.8□□□□□ -0.2
CYFIP1-211ENST00000619348 GAKO14976 1311 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 PARP4Q9UKK3 1724 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 K7ERI5 159 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 DCXO43602 365 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 UGT1A9O60656 530 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 CD48P09326 243 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 ROR1Q01973 937 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 EFHC2Q5JST6 749 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 NAT14Q8WUY8 206 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 ZFAND2BQ8WV99 257 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 MBOAT7Q96N66 472 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 Q9H521 79 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 UGT1A7Q9HAW7 530 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 UGT1A10Q9HAW8 530 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 UGT1A8Q9HAW9 530 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 AVENQ9NQS1 362 aaPredicted RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 ENO3P13929 434 aaPredicted RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 VCLP18206 1134 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 GPC3P51654 580 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 GATA6Q92908 595 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 PPWD1Q96BP3 646 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 SEPT10Q9P0V9 454 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
CYFIP1-211ENST00000619348 TBC1D12O60347 775 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 TM7SF2O76062 418 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 DLDP09622 509 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SERPINB5P36952 375 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 NLRP11P59045 1033 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 TBC1D25Q3MII6 688 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 TMCO4Q5TGY1 634 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 ZNF398Q8TD17 642 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 GPATCH2LQ9NWQ4 482 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 UNGP13051 313 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 NOMO3P69849 1222 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 GSTA3Q16772 222 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 ENOSF1Q7L5Y1 443 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 XAB2Q9HCS7 855 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 CCDC78A2IDD5 438 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 ECE2O60344 883 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 PRAMEP78395 509 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 CRADDP78560 199 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 MRPS22P82650 360 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 CTC1Q2NKJ3 1217 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 KCTD21Q4G0X4 260 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 NET1Q7Z628 596 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SLC26A11Q86WA9 606 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 IGDCC3Q8IVU1 814 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 THNSL1Q8IYQ7 743 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 RPL26L1Q9UNX3 145 aaKnown RBP13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 COMMD3-BMI1R4GMX3 469 aa13.78□□□□□ -0.2
CYFIP1-211ENST00000619348 SYNJ2BP-COX16A0A087WUM0 186 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 TRAFD1O14545 582 aaPredicted RBP13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 ATP6V1G1O75348 118 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 FOLH1Q04609 750 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 WDR78Q5VTH9 848 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 POLR3FQ9H1D9 316 aaPredicted RBP13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 COX16Q9P0S2 106 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.2
CYFIP1-211ENST00000619348 ATP8B3O60423 1300 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms