RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 PFKLP17858 780 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 GTF2H1P32780 548 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 PPP3CCP48454 512 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 MCCD1P59942 119 aaPredicted RBP23.22■■□□□ 1.31
TRAF4-217ENST00000618771 TAF10Q12962 218 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 USP4Q13107 963 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 ORC1Q13415 861 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 LRRC32Q14392 662 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 ZNF77Q15935 545 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 KRT39Q6A163 491 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 PAQR9Q6ZVX9 377 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 FUKQ8N0W3 1084 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 NUP93Q8N1F7 819 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 CCDC150Q8NCX0 1101 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 TTC16Q8NEE8 873 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 SLITRK1Q96PX8 696 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 KCNK16Q96T55 309 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 APOBEC3GQ9HC16 384 aaKnown RBP23.22■■□□□ 1.31
TRAF4-217ENST00000618771 DMAP1Q9NPF5 467 aaPredicted RBP23.22■■□□□ 1.31
TRAF4-217ENST00000618771 PRMT8Q9NR22 394 aaPredicted RBP23.22■■□□□ 1.31
TRAF4-217ENST00000618771 KRT82Q9NSB4 513 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 CIZ1Q9ULV3 898 aaPredicted RBP23.22■■□□□ 1.31
TRAF4-217ENST00000618771 PCDHGA2Q9Y5H1 932 aa23.22■■□□□ 1.31
TRAF4-217ENST00000618771 ZNF840PA6NDX5 716 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 CCDC130P13994 396 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 ARSAP15289 507 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 TRIM21P19474 475 aaKnown RBP23.21■■□□□ 1.31
TRAF4-217ENST00000618771 INCA1Q0VD86 236 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 PON2Q15165 354 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 PDGFRLQ15198 375 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 RSPO4Q2I0M5 234 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-217ENST00000618771 ELOA2Q8IYF1 753 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-217ENST00000618771 CRYBG2Q8N1P7 616 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 NIF3L1Q9GZT8 377 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 CYP3A43Q9HB55 503 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 ARHGAP26Q9UNA1 814 aa23.21■■□□□ 1.31
TRAF4-217ENST00000618771 SPTBN2O15020 2390 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 STX10O60499 249 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 AP1G2O75843 785 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 RTN3O95197 1032 aaPredicted RBP23.2■■□□□ 1.3
TRAF4-217ENST00000618771 ABL1P00519 1130 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 YWHAQP27348 245 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 MXI1P50539 228 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 PMS1P54277 932 aaKnown RBP23.2■■□□□ 1.3
TRAF4-217ENST00000618771 FKBP3Q00688 224 aaKnown RBP23.2■■□□□ 1.3
TRAF4-217ENST00000618771 ANKRD40Q6AI12 368 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 TSSK4Q6SA08 328 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 MAMSTRQ6ZN01 415 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 SH3RF2Q8TEC5 729 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 RBM12Q9NTZ6 932 aaKnown RBP23.2■■□□□ 1.3
TRAF4-217ENST00000618771 FAM49BQ9NUQ9 324 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
TRAF4-217ENST00000618771 OTOL1A6NHN0 477 aaPredicted RBP23.19■■□□□ 1.3
TRAF4-217ENST00000618771 SLC16A3O15427 465 aaKnown RBP23.19■■□□□ 1.3
TRAF4-217ENST00000618771 TCF3P15923 654 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 IFNAR2P48551 515 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 LRRC63Q05C16 580 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 STIM1Q13586 685 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 WDR44Q5JSH3 913 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 DGKKQ5KSL6 1271 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 ZC3H3Q8IXZ2 948 aaKnown RBP23.19■■□□□ 1.3
TRAF4-217ENST00000618771 ZBTB44Q8NCP5 570 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 SLC2A14Q8TDB8 520 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 OSCP1Q8WVF1 389 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 FBXO32Q969P5 355 aa23.19■■□□□ 1.3
TRAF4-217ENST00000618771 DUS2Q9NX74 493 aaKnown RBP23.19■■□□□ 1.3
TRAF4-217ENST00000618771 MYOFQ9NZM1 2061 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 TRIM49BA6NDI0 452 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 PSMA7O14818 248 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 CD58P19256 250 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 CCR3P51677 355 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 SLC5A3P53794 718 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 DCAF17Q5H9S7 520 aaPredicted RBP23.18■■□□□ 1.3
TRAF4-217ENST00000618771 ISM2Q6H9L7 571 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 CPA6Q8N4T0 437 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 C12orf29Q8N999 325 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 FBXL13Q8NEE6 735 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 PDZD8Q8NEN9 1154 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 SCAMP5Q8TAC9 235 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 SEMA4DQ92854 862 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 TWNKQ96RR1 684 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 NT5C1AQ9BXI3 368 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 MAN1B1Q9UKM7 699 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 WNT6Q9Y6F9 365 aa23.18■■□□□ 1.3
TRAF4-217ENST00000618771 TNFRSF10BO14763 440 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 GADD45BO75293 160 aaPredicted RBP23.17■■□□□ 1.3
TRAF4-217ENST00000618771 OLFM2O95897 454 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 OAS1P00973 400 aaKnown RBP23.17■■□□□ 1.3
TRAF4-217ENST00000618771 SLC7A9P82251 487 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 AMPD2Q01433 879 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 CCINQ13939 588 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 GAS6Q14393 721 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 PPP2R5DQ14738 602 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 TCERG1LQ5VWI1 586 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 Q6ZS52 159 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 SPEM1Q8N4L4 309 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 ZMIZ2Q8NF64 920 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 OVCA2Q8WZ82 227 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 ATP2A3Q93084 1043 aa23.17■■□□□ 1.3
TRAF4-217ENST00000618771 CHFRQ96EP1 664 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms