RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 FMO1Q01740 532 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 OTUD4Q01804 1114 aaKnown RBP14.46□□□□□ -0.1
CIITA-213ENST00000618327 SMAD1Q15797 465 aaKnown RBP14.46□□□□□ -0.1
CIITA-213ENST00000618327 ICE2Q659A1 982 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 ATG16L1Q676U5 607 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 KLC3Q6P597 504 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 DAW1Q8N136 415 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 CAPNS2Q96L46 248 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 MLXIPLQ9NP71 852 aa14.46□□□□□ -0.1
CIITA-213ENST00000618327 MTSS1O43312 755 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 GPC4O75487 556 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 HARS2P49590 506 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 PRAMEP78395 509 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 ADIGQ0VDE8 80 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 CNGA2Q16280 664 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 KDELC2Q7Z4H8 507 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 HDAC11Q96DB2 347 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 FAM129AQ9BZQ8 928 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 XAB2Q9HCS7 855 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 CES2O00748 559 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 CDH16O75309 829 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 MAP3K6O95382 1288 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 RPL10AP62906 217 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 C4orf22Q6V702 233 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 OR2W6PQ8NHA6 318 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 TRIM56Q9BRZ2 755 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 ZFATQ9P243 1243 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 AP3B1O00203 1094 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 CYBBP04839 570 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 PYGMP11217 842 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 MAGEA9P43362 315 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 SP2Q02086 613 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 ZNF662Q6ZS27 426 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 TMEM86AQ8N2M4 240 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 TFB1MQ8WVM0 346 aaKnown RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 YME1L1Q96TA2 773 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 PITPNM3Q9BZ71 974 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 THEGQ9P2T0 379 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 GJB6O95452 261 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 CCNG2Q16589 344 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 DENND1BQ6P3S1 775 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 MIB1Q86YT6 1006 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 REM2Q8IYK8 340 aaPredicted RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 RIN2Q8WYP3 895 aaPredicted RBP14.45□□□□□ -0.1
CIITA-213ENST00000618327 TMEM39AQ9NV64 488 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 SCOCQ9UIL1 159 aa14.45□□□□□ -0.1
CIITA-213ENST00000618327 E5RJQ4 531 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 PSMD3O43242 534 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 B4GALT4O60513 344 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 NOL4O94818 638 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CCDC130P13994 396 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 YWHAZP63104 245 aaKnown RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 MTM1Q13496 603 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 TAF11Q15544 211 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ACCSLQ4AC99 568 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 RASSF3Q86WH2 238 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 TMEM139Q8IV31 216 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ATP6V0D2Q8N8Y2 350 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ZBTB10Q96DT7 871 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 SMARCD1Q96GM5 515 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 SENP6Q9GZR1 1112 aaPredicted RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 DMAC2Q9NW81 257 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ZMYM2Q9UBW7 1377 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 TREHO43280 583 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CA12O43570 354 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 IRF1P10914 325 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CD52P31358 61 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 TMPRSS15P98073 1019 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 DCLK2Q8N568 766 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 KRT35Q92764 455 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 KREMEN1Q96MU8 473 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ZIM3Q96PE6 472 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 BCAS3Q9H6U6 928 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CNTNAP2Q9UHC6 1331 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 AGTP01019 485 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 RAG1P15918 1043 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 POLE2P56282 527 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 DRP2Q13474 957 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 LONRF1Q17RB8 773 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 FAM171A1Q5VUB5 890 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 IL31Q6EBC2 164 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CREG2Q8IUH2 290 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 LENG1Q96BZ8 264 aaPredicted RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 NXF3Q9H4D5 531 aaKnown RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 SUDS3Q9H7L9 328 aaPredicted RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 ANGPTL3Q9Y5C1 460 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 PCDHA2Q9Y5H9 948 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 ANKRD65E5RJM6 399 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 URODP06132 367 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 CTCFP49711 727 aaPredicted RBP14.44□□□□□ -0.1
CIITA-213ENST00000618327 SLC6A3Q01959 620 aa14.44□□□□□ -0.1
CIITA-213ENST00000618327 BEND6Q5SZJ8 279 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms