RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CHST12Q9NRB3 414 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 VPS18Q9P253 973 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DNPEPQ9ULA0 475 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 USP18Q9UMW8 372 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 FAN1Q9Y2M0 1017 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 SZT2Q5T011 3432 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DDHD2O94830 711 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 TUBBP07437 444 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CHRNA3P32297 505 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CCL23P55773 120 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 KRT17Q04695 432 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 IFRD2Q12894 506 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 KLF1Q13351 362 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 SYCP2LQ5T4T6 812 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 KCTD16Q68DU8 428 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PIGZQ86VD9 579 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 KATNAL2Q8IYT4 538 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 KCTD6Q8NC69 237 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 FAM149B1Q96BN6 582 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 UCN2Q96RP3 112 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DNAJB4Q9UDY4 337 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ATP8A1Q9Y2Q0 1164 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PRG3Q9Y2Y8 225 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CHD7Q9P2D1 2997 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 C2CD4BA6NLJ0 364 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 OR4Q2P0C623 313 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 LRPAP1P30533 357 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ADIGQ0VDE8 80 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DSC3Q14574 896 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CA9Q16790 459 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 TCTN1Q2MV58 587 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DNAJC21Q5F1R6 531 aaKnown RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 DUPD1Q68J44 220 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 NPNTQ6UXI9 565 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 SPOCD1Q6ZMY3 1216 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 CCDC25Q86WR0 208 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ECHDC2Q86YB7 292 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
NEK3-207ENST00000617054 CRYBG2Q8N1P7 616 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ANKRD52Q8NB46 1076 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DBF4BQ8NFT6 615 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 EXD1Q8NHP7 514 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 PCED1BQ96HM7 432 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 DCLK3Q9C098 648 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.1
NEK3-207ENST00000617054 CENPHQ9H3R5 247 aa8.18□□□□□ -1.1
NEK3-207ENST00000617054 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.18□□□□□ -1.1
NEK3-207ENST00000617054 PDCD11Q14690 1871 aaKnown RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 EYSQ5T1H1 3165 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 GOLGA6BA6NDN3 693 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 NT5C1B-RDH14C9J2C7 533 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 NBNO60934 754 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 RNF8O76064 485 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 GPD1P21695 349 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 PNPLA4P41247 253 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 SLC6A3Q01959 620 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 GPNMBQ14956 572 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 HFE2Q6ZVN8 426 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 GSTA5Q7RTV2 222 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 GPRIN1Q7Z2K8 1008 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 UNC93AQ86WB7 457 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 FAM172AQ8WUF8 416 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 UBLCP1Q8WVY7 318 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 TMEM121Q9BTD3 319 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 PPP1R12CQ9BZL4 782 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 KRT82Q9NSB4 513 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 KIAA1257Q9ULG3 409 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 GIT1Q9Y2X7 761 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 MOXD2PA6NHM9 499 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 C3orf70A6NLC5 250 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 ARVCFO00192 962 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 ATP8B1O43520 1251 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 CST8O60676 142 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 ECEL1O95672 775 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 CDKN2BP42772 138 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 ZNF143P52747 638 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 BST2Q10589 180 aaKnown RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 UAP1Q16222 522 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 PPP6R3Q5H9R7 873 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 CLLU1OSQ5K130 101 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 ZDHHC24Q6UX98 284 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 CD300LGQ6UXG3 332 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 MRPL10Q7Z7H8 261 aaKnown RBP8.17□□□□□ -1.1
NEK3-207ENST00000617054 TMEM110Q86TL2 294 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 RPAINQ86UA6 219 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 LRRTM3Q86VH5 581 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 SLAIN1Q8ND83 568 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 ARL8AQ96BM9 186 aa8.17□□□□□ -1.1
NEK3-207ENST00000617054 FAXDC2Q96IV6 333 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms