RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 OSBPL8Q9BZF1 889 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 DCLK3Q9C098 648 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 ADAM7Q9H2U9 754 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 SCINQ9Y6U3 715 aa11.97□□□□□ -0.49
PCDHGA9-202ENST00000616887 HOXA11P31270 313 aaPredicted RBP11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 GBP1P32455 592 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 BEX3Q00994 111 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 DGKDQ16760 1214 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 MFSD7Q6UXD7 560 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 RBM12BQ8IXT5 1001 aaKnown RBP11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 ARFGAP1Q8N6T3 406 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 PHC3Q8NDX5 983 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 UBA3Q8TBC4 463 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 HPDLQ96IR7 371 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 VCPIP1Q96JH7 1222 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 ANKRD27Q96NW4 1050 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 LPIN3Q9BQK8 851 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 APOL6Q9BWW8 343 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 SNTG2Q9NY99 539 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 TUBGCP4Q9UGJ1 667 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 PCDHGA4Q9Y5G9 962 aa11.96□□□□□ -0.49
PCDHGA9-202ENST00000616887 PSTPIP1O43586 416 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 AOC2O75106 756 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 IL18RAPO95256 599 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 KRT1P04264 644 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 CYP3A5P20815 502 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 VEGFBP49765 207 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 PMS2P54278 862 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 MTA1Q13330 715 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLC29A2Q14542 456 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 PPP2R5EQ16537 467 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 MYLK4Q86YV6 388 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 MAIP1Q8WWC4 291 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 C18orf25Q96B23 403 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 KIF12Q96FN5 646 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 NSRP1Q9H0G5 558 aaKnown RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 NXF3Q9H4D5 531 aaKnown RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 AAASQ9NRG9 546 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 SAE1Q9UBE0 346 aaPredicted RBP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 BLOC1S6Q9UL45 172 aa11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCDHGA9-202ENST00000616887 M0QYV0 167 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 CREB3O43889 395 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 CILPO75339 1184 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 MICAL2O94851 1124 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZSCAN5DPP0CG00 497 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 IL1R2P27930 398 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 MMP13P45452 471 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 SLCO1A2P46721 670 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 IFI35P80217 286 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 APLFQ8IW19 511 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZWILCHQ9H900 591 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 METTL5Q9NRN9 209 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 DNAAF2Q9NVR5 837 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 PCDHGC3Q9UN70 934 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF232Q9UNY5 417 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 USP15Q9Y4E8 981 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 PODXLO00592 558 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 LSM8O95777 96 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 CALB1P05937 261 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 CYP2B6P20813 491 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 EIF4BP23588 611 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 AKAP5P24588 427 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 IVDP26440 423 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 NDST1P52848 882 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 PSMC1P62191 440 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 NFX1Q12986 1120 aaKnown RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 TAF5Q15542 800 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 CLUL1Q15846 466 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ASRGL1Q7L266 308 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 TLK2Q86UE8 772 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 KATNAL2Q8IYT4 538 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 UCMAQ8WVF2 138 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ACAP3Q96P50 834 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 ADAMTS10Q9H324 1103 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 MMADHCQ9H3L0 296 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
PCDHGA9-202ENST00000616887 GRAP2O75791 330 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 CD48P09326 243 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 ETS1P14921 441 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 CALB2P22676 271 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 CDH5P33151 784 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 DYNLT1P63172 113 aa11.94□□□□□ -0.5
PCDHGA9-202ENST00000616887 NOGQ13253 232 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms