RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SNIP1Q8TAD8 396 aaKnown RBP9.59□□□□□ -0.87
COL12A1-211ENST00000615798 KIAA1586Q9HCI6 787 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 MATN2O00339 956 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 ZBED4O75132 1171 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 SURF1Q15526 300 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 OR8H3Q8N146 312 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 HDDC3Q8N4P3 179 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 TGFBRAP1Q8WUH2 860 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 FAM20AQ96MK3 541 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
COL12A1-211ENST00000615798 FAM47DPA6NHR8 397 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 MCAMP43121 646 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 STAT4Q14765 748 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 NYAP1Q6ZVC0 841 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 C11orf74Q86VG3 221 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FBXO11Q86XK2 927 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CCDC71Q8IV32 467 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SETD9Q8NE22 299 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 BBS4Q96RK4 519 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SSX3Q99909 188 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SLC13A1Q9BZW2 595 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PCDH12Q9NPG4 1184 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SNX7Q9UNH6 387 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SUPT3HB4E1H0 165 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 MAGEA12P43365 314 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 GALNT3Q14435 633 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 POLD3Q15054 466 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 DYMQ7RTS9 669 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TRPV1Q8NER1 839 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 NUAK2Q9H093 628 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 GPN1Q9HCN4 374 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PGK1P00558 417 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SKIV2L2P42285 1042 aaKnown RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 KPNA1P52294 538 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ARID5BQ14865 1188 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 RHEBQ15382 184 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ARHGEF16Q5VV41 709 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 AMER2Q8N7J2 671 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SPATA16Q9BXB7 569 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TRIM10Q9UDY6 481 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SALL3Q9BXA9 1300 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PNMA6FA0A0J9YX94 578 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ALFQ53S48 1182 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 DNAJC24Q6P3W2 148 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SYDE1Q6ZW31 735 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ANKRD13CQ8N6S4 541 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 KBTBD8Q8NFY9 601 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TIPINQ9BVW5 301 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CHKBQ9Y259 395 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ZNF609O15014 1411 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TTC3P53804 2025 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 MED7O43513 233 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PRPSAP2O60256 369 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FGGP02679 453 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ZNF827Q17R98 1081 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 NAALADL2Q58DX5 795 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 BRDTQ58F21 947 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CD163L1Q9NR16 1453 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TRPC5OSA6NMA1 111 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TIMM44O43615 452 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FAM20BO75063 409 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FKBP9O95302 570 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SERPINA3P01011 423 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 IFNA7P01567 189 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SLC16A1P53985 500 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FKBP9P1Q75LS8 142 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PROSER1Q86XN7 944 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PCDHA1Q9Y5I3 950 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ABRQ12979 859 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SCAIQ8N9R8 606 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 OR8H1Q8NGG4 311 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CKAP2Q8WWK9 683 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PCMTD2Q9NV79 361 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 MYCLP12524 364 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 BCAMP50895 628 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CDK17Q00537 523 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 BYSLQ13895 437 aaKnown RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ZBTB6Q15916 424 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 SMAD5Q99717 465 aaKnown RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 FARSBQ9NSD9 589 aaKnown RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TMEM51Q9NW97 253 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 EVLQ9UI08 416 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 TRIP11Q15643 1979 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CCNKO75909 580 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 ATP13A4Q4VNC1 1196 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 CENPLQ8N0S6 344 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-211ENST00000615798 PIGOQ8TEQ8 1089 aa9.58□□□□□ -0.88
COL12A1-211ENST00000615798 HPCAP84074 193 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 EPB41L1Q9H4G0 881 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 TRNAU1APQ9NX07 287 aaKnown RBP9.57□□□□□ -0.88
COL12A1-211ENST00000615798 MAFFQ9ULX9 164 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 CLEC4AQ9UMR7 237 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 RAB43Q86YS6 212 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 SAMSN1Q9NSI8 373 aaKnown RBP9.57□□□□□ -0.88
COL12A1-211ENST00000615798 PSMD11O00231 422 aa9.57□□□□□ -0.88
COL12A1-211ENST00000615798 ULK1O75385 1050 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms