RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 ACTN1P12814 892 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 PDE6CP51160 858 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 LRRC63Q05C16 580 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 MEA1Q16626 185 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 BMT2Q1RMZ1 405 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 NEPROQ6NW34 567 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
SRRT-215ENST00000614484 RTN4RL1Q86UN2 441 aaPredicted RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 TNIP2Q8NFZ5 429 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 HASPINQ8TF76 798 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 ADPGKQ9BRR6 497 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 ZNF180Q9UJW8 692 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 A0A0B4J269 797 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 NCK2O43639 380 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 CCDC153Q494R4 210 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 ZNF362Q5T0B9 420 aaPredicted RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 NOTUMQ6P988 496 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 GJB7Q6PEY0 223 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 MREGQ8N565 214 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 DRC3Q9H069 523 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 TMEM134Q9H6X4 195 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 GDF3Q9NR23 364 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 FAM207AQ9NSI2 230 aaPredicted RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 TBK1Q9UHD2 729 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 PCDHB2Q9Y5E7 798 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 COL6A3P12111 3177 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 SCN5AQ14524 2016 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 DPPA5A6NC42 116 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 TMEM151BQ8IW70 566 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 CCT6BQ92526 530 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 C18orf25Q96B23 403 aaPredicted RBP12.6□□□□□ -0.39
SRRT-215ENST00000614484 GAD1Q99259 594 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 MTMR12Q9C0I1 747 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 STK39Q9UEW8 545 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 IPPQ9Y573 584 aa12.6□□□□□ -0.39
SRRT-215ENST00000614484 F8W810 466 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 RECQL4O94761 1208 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 NFICP08651 508 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 SKIP12755 728 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
SRRT-215ENST00000614484 CRY1Q16526 586 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 ANKRD33Q7Z3H0 272 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 ZNF554Q86TJ5 538 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 MS4A14Q96JA4 679 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CGREF1Q99674 301 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 NOP53Q9NZM5 478 aaKnown RBP12.59□□□□□ -0.39
SRRT-215ENST00000614484 ACAD8Q9UKU7 415 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CNTNAP2Q9UHC6 1331 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CD97P48960 835 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 BFSP2Q13515 415 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
SRRT-215ENST00000614484 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
SRRT-215ENST00000614484 SPOPLQ6IQ16 392 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CAPN12Q6ZSI9 719 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 MTUS1Q9ULD2 1270 aa12.59□□□□□ -0.39
SRRT-215ENST00000614484 LACTBL1A8MY62 500 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 CLASP2O75122 1294 aaKnown RBP12.58□□□□□ -0.4
SRRT-215ENST00000614484 DNA2P51530 1060 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 UBXN11Q5T124 520 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 KRT77Q7Z794 578 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 TBC1D1Q86TI0 1168 aaPredicted RBP12.58□□□□□ -0.4
SRRT-215ENST00000614484 VPS52Q8N1B4 723 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 LRRC43Q8N309 656 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 LINC01599Q8WXQ3 324 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 ST6GALNAC4Q9H4F1 302 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 FAM105AQ9NUU6 356 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 SQORQ9Y6N5 450 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 GPR182O15218 404 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 CALCAP01258 141 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 SLC9A1P19634 815 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 VAMP7P51809 220 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 MTTPP55157 894 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
SRRT-215ENST00000614484 C1orf74Q96LT6 269 aa12.58□□□□□ -0.4
SRRT-215ENST00000614484 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms