RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CFAP97Q9P2B7 532 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 TFIP11Q9UBB9 837 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 DNAH14Q0VDD8 3507 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 GREB1Q4ZG55 1949 aa19.02■□□□□ 0.63
SMN2-213ENST00000614240 ALDH1A2O94788 518 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 KCNK5O95279 499 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 CYP17A1P05093 508 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 FAM163BP0C2L3 166 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 CYP24A1Q07973 514 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 DHCR24Q15392 516 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 E2F4Q16254 413 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 DDX42Q86XP3 938 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMN2-213ENST00000614240 ADGRG2Q8IZP9 1017 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 ZNF518BQ9C0D4 1074 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 MMP17Q9ULZ9 603 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 SPAG17Q6Q759 2223 aa19.01■□□□□ 0.63
SMN2-213ENST00000614240 C4orf47A7E2U8 309 aa19■□□□□ 0.63
SMN2-213ENST00000614240 TGFB1I1O43294 461 aa19■□□□□ 0.63
SMN2-213ENST00000614240 ADH1CP00326 375 aa19■□□□□ 0.63
SMN2-213ENST00000614240 APODP05090 189 aa19■□□□□ 0.63
SMN2-213ENST00000614240 YWHAQP27348 245 aa19■□□□□ 0.63
SMN2-213ENST00000614240 PMLP29590 882 aa19■□□□□ 0.63
SMN2-213ENST00000614240 MYL6P60660 151 aa19■□□□□ 0.63
SMN2-213ENST00000614240 SNRPFP62306 86 aaKnown RBP19■□□□□ 0.63
SMN2-213ENST00000614240 MRPS21P82921 87 aaKnown RBP19■□□□□ 0.63
SMN2-213ENST00000614240 DAB2IPQ5VWQ8 1189 aa19■□□□□ 0.63
SMN2-213ENST00000614240 EPM2AIP1Q7L775 607 aaPredicted RBP19■□□□□ 0.63
SMN2-213ENST00000614240 CYP2U1Q7Z449 544 aa19■□□□□ 0.63
SMN2-213ENST00000614240 KIAA1958Q8N8K9 716 aa19■□□□□ 0.63
SMN2-213ENST00000614240 FBXO32Q969P5 355 aa19■□□□□ 0.63
SMN2-213ENST00000614240 CNOT6LQ96LI5 555 aaKnown RBP19■□□□□ 0.63
SMN2-213ENST00000614240 PNKPQ96T60 521 aa19■□□□□ 0.63
SMN2-213ENST00000614240 DPEP3Q9H4B8 488 aa19■□□□□ 0.63
SMN2-213ENST00000614240 ATP8B3O60423 1300 aa19■□□□□ 0.63
SMN2-213ENST00000614240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 CLDN5O00501 218 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 KHNYNO15037 678 aaKnown RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 MAP3K13O43283 966 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 CUTAO60888 179 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 PPP6R2O75170 966 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 KLF8O95600 359 aaPredicted RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 OAS1P00973 400 aaKnown RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 SLC6A11P48066 632 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 DHPSP49366 369 aaPredicted RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 CRY1Q16526 586 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 PMS2CLQ68D20 193 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 PSAPL1Q6NUJ1 521 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 RASSF3Q86WH2 238 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 ALLCQ8N6M5 410 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 B3GALNT2Q8NCR0 500 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 PDZD8Q8NEN9 1154 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
SMN2-213ENST00000614240 C7orf25Q9BPX7 421 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 MED10Q9BTT4 135 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 B3GNT5Q9BYG0 378 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 BCCIPQ9P287 314 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMN2-213ENST00000614240 TBC1D14Q9P2M4 693 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 NME7Q9Y5B8 376 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 UBE4BO95155 1302 aa18.99■□□□□ 0.63
SMN2-213ENST00000614240 ANTXRLA6NF34 631 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 EXOC3O60645 756 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 RTN3O95197 1032 aaPredicted RBP18.98■□□□□ 0.63
SMN2-213ENST00000614240 KAT7O95251 611 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 OLFM2O95897 454 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 ADH5P11766 374 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 BCKDHBP21953 392 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 ATICP31939 592 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 TIE1P35590 1138 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 NOVA1P51513 510 aaKnown RBP18.98■□□□□ 0.63
SMN2-213ENST00000614240 CACNA2D1P54289 1103 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 BIRC3Q13489 604 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 GAB4Q2WGN9 574 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 CNNM4Q6P4Q7 775 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 UNC13DQ70J99 1090 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 NUP93Q8N1F7 819 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 TXNDC5Q8NBS9 432 aaKnown RBP18.98■□□□□ 0.63
SMN2-213ENST00000614240 MDGA1Q8NFP4 955 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 SCFD1Q8WVM8 642 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 BLZF1Q9H2G9 400 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 POLMQ9NP87 494 aaPredicted RBP18.98■□□□□ 0.63
SMN2-213ENST00000614240 ARHGEF4Q9NR80 690 aa18.98■□□□□ 0.63
SMN2-213ENST00000614240 CNOT1A5YKK6 2376 aaKnown RBP18.98■□□□□ 0.63
SMN2-213ENST00000614240 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.97■□□□□ 0.63
SMN2-213ENST00000614240 KDSRQ06136 332 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 EOGTQ5NDL2 527 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
SMN2-213ENST00000614240 BTBD8Q5XKL5 378 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 RHBDF2Q6PJF5 856 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 SHC4Q6S5L8 630 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
SMN2-213ENST00000614240 ZNF516Q92618 1163 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 PIGKQ92643 395 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 SPACA7Q96KW9 195 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 NACA2Q9H009 215 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 MAGEF1Q9HAY2 307 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 SLC39A2Q9NP94 309 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 CGNQ9P2M7 1197 aaKnown RBP18.97■□□□□ 0.63
SMN2-213ENST00000614240 CHORDC1Q9UHD1 332 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms