RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 ADAM21Q9UKJ8 722 aa13.6□□□□□ -0.23
CCL4-201ENST00000613947 PPP2R2CQ9Y2T4 447 aa13.6□□□□□ -0.23
CCL4-201ENST00000613947 ASB3Q9Y575 518 aa13.6□□□□□ -0.23
CCL4-201ENST00000613947 CLUHO75153 1309 aa13.6□□□□□ -0.23
CCL4-201ENST00000613947 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 MYH10P35580 1976 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 TEX33O43247 280 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 ADORA2BP29275 332 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 CCR2P41597 374 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 TBX2Q13207 712 aaPredicted RBP13.59□□□□□ -0.23
CCL4-201ENST00000613947 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 SLC5A9Q2M3M2 681 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 ITIH5Q86UX2 942 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 TMEM139Q8IV31 216 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 RBBP8NLQ8NC74 664 aaPredicted RBP13.59□□□□□ -0.23
CCL4-201ENST00000613947 ITFG1Q8TB96 612 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 LRRC3Q9BY71 257 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 KRT82Q9NSB4 513 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 CNTN6Q9UQ52 1028 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
CCL4-201ENST00000613947 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.23
CCL4-201ENST00000613947 AP1G2O75843 785 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 BEST1O76090 585 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 NOL4O94818 638 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 SEC31AO94979 1220 aaKnown RBP13.58□□□□□ -0.23
CCL4-201ENST00000613947 CALCAP01258 141 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 KRT5P13647 590 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 UCHL3P15374 230 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 CD19P15391 556 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.23
CCL4-201ENST00000613947 FSHRP23945 695 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 ZNF132P52740 706 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 EPHA5P54756 1037 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 UBASH3AP57075 661 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 TMC8Q8IU68 726 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 TCEAL4Q96EI5 215 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 SMARCD1Q96GM5 515 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 C8orf48Q96LL4 319 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 ERGIC2Q96RQ1 377 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 SMOQ99835 787 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.23
CCL4-201ENST00000613947 RSPH14Q9UHP6 348 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 RAB21Q9UL25 225 aa13.58□□□□□ -0.23
CCL4-201ENST00000613947 ATP8B3O60423 1300 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 MYO10Q9HD67 2058 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 FOXN3O00409 490 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 TRIM66O15016 1216 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 SERPINC1P01008 464 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 PAEPP09466 180 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 ZP2Q05996 745 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 TAF12Q16514 161 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 LONRF2Q1L5Z9 754 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 SGO2Q562F6 1265 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 ARHGAP17Q68EM7 881 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 LEKR1Q6ZMV7 388 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 PDZD4Q76G19 769 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 GET4Q7L5D6 327 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 ADHFE1Q8IWW8 467 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 TFAP2BQ92481 460 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 SHC3Q92529 594 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 NAA15Q9BXJ9 866 aaKnown RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 ZNF334Q9HCZ1 680 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 ACP6Q9NPH0 428 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 PRKAG3Q9UGI9 489 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
CCL4-201ENST00000613947 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 RRP15Q9Y3B9 282 aaKnown RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
CCL4-201ENST00000613947 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 SLC38A8A6NNN8 435 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 EPHB6O15197 1021 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 FANCGO15287 622 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 FAM200BP0CF97 657 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 CSH1P0DML2 217 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 CSH2P0DML3 217 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 VDRP11473 427 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 MYL4P12829 197 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 GJA1P17302 382 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 ANXA13P27216 316 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 USP8P40818 1118 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 MAGEA9P43362 315 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 NR1I3Q14994 352 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
CCL4-201ENST00000613947 PRSS36Q5K4E3 855 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms