RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 MCEEQ96PE7 176 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 OSBPL9Q96SU4 736 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 SLC9A7Q96T83 725 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 HNRNPABQ99729 332 aaKnown RBP8.53□□□□□ -1.04
TARDBP-213ENST00000611963 MRPL9Q9BYD2 267 aaKnown RBP8.53□□□□□ -1.04
TARDBP-213ENST00000611963 RHOBTB2Q9BYZ6 727 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 CWH43Q9H720 699 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
TARDBP-213ENST00000611963 KRT82Q9NSB4 513 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 PARVAQ9NVD7 372 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 TMLHEQ9NVH6 421 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 SMARCAL1Q9NZC9 954 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 CDC23Q9UJX2 597 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 ADAM28Q9UKQ2 775 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 DSEQ9UL01 958 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 PCDHA11Q9Y5I1 949 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 ALG6Q9Y672 507 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 SAR1BQ9Y6B6 198 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 SCINQ9Y6U3 715 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
TARDBP-213ENST00000611963 ARHGEF37A1IGU5 675 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 LCHNA4D1U4 455 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MYO1FO00160 1098 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 PDE2AO00408 941 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 KCNK3O14649 394 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 DDX3YO15523 660 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SPOPO43791 374 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 RNF40O75150 1001 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 AP1G2O75843 785 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 DGKIO75912 1065 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SLU7O95391 586 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 ALDH2P05091 517 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CA3P07451 260 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 OR4Q2P0C623 313 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 FAM200BP0CF97 657 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 LCP1P13796 627 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 GABRB2P47870 512 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CACNA2D1P54289 1103 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 TSPY1Q01534 308 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 OGDHQ02218 1023 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 WHAMMP3Q1A5X7 153 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 INTS6LQ5JSJ4 861 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 FAM102AQ5T9C2 384 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 FAM171A1Q5VUB5 890 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 FUT10Q6P4F1 479 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 DCUN1D2Q6PH85 259 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 TAS1R1Q7RTX1 841 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SPRED2Q7Z698 418 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 LRRTM3Q86VH5 581 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 THEM5Q8N1Q8 247 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MYRIPQ8NFW9 859 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 JOSD2Q8TAC2 188 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MYCBPAPQ8TBZ2 947 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 IPO4Q8TEX9 1081 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CLEC4CQ8WTT0 213 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 KRT35Q92764 455 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 TOP1MTQ969P6 601 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MCRS1Q96EZ8 462 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 PCED1BQ96HM7 432 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MS4A14Q96JA4 679 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CALR3Q96L12 384 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 PKMYT1Q99640 499 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 TMEM175Q9BSA9 504 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SELENOOQ9BVL4 669 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 DUSP16Q9BY84 665 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SLC28A3Q9HAS3 691 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 MRPL47Q9HD33 250 aaKnown RBP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 TMEM30AQ9NV96 361 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 EHD2Q9NZN4 543 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 USTQ9Y2C2 406 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 CUL9Q8IWT3 2517 aa8.52□□□□□ -1.05
TARDBP-213ENST00000611963 SF3B1O75533 1304 aaKnown RBP eCLIP8.52□□□□□ -1.05
TARDBP-213ENST00000611963 UQCRHLA0A096LP55 91 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 TMEM191CA6NGB0 347 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 EPOPA6NHQ4 379 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 SIGLEC16A6NMB1 481 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 XPO1O14980 1071 aaKnown RBP8.51□□□□□ -1.05
TARDBP-213ENST00000611963 PAPSS1O43252 624 aaPredicted RBP8.51□□□□□ -1.05
TARDBP-213ENST00000611963 TRAPPC3O43617 180 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 EFCAB14O75071 495 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 GRAP2O75791 330 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 BEST1O76090 585 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 PROSCO94903 275 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 UQCRHP07919 91 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 NPR3P17342 541 aa8.51□□□□□ -1.05
TARDBP-213ENST00000611963 TCP1P17987 556 aaKnown RBP8.51□□□□□ -1.05
TARDBP-213ENST00000611963 BDNFP23560 247 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms