RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 FBXO44Q9H4M3 255 aa14.19□□□□□ -0.14
SENP3-209ENST00000610454 C8orf33Q9H7E9 229 aaPredicted RBP14.19□□□□□ -0.14
SENP3-209ENST00000610454 RWDD2AQ9UIY3 292 aa14.19□□□□□ -0.14
SENP3-209ENST00000610454 NDRG2Q9UN36 371 aaKnown RBP14.19□□□□□ -0.14
SENP3-209ENST00000610454 COQ4Q9Y3A0 265 aa14.19□□□□□ -0.14
SENP3-209ENST00000610454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.19□□□□□ -0.14
SENP3-209ENST00000610454 HELZP42694 1942 aaKnown RBP14.19□□□□□ -0.14
SENP3-209ENST00000610454 C2orf78A6NCI8 922 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 H0Y858 1186 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 LRRN2O75325 713 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 MLLT6P55198 1093 aaPredicted RBP14.18□□□□□ -0.14
SENP3-209ENST00000610454 LRMPQ12912 555 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 CUL2Q13617 745 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 MTF1Q14872 753 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 ITPRIPL2Q3MIP1 535 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 OVCA2Q8WZ82 227 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 TATDN2Q93075 761 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 JAKMIP2Q96AA8 810 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 NT5C1BQ96P26 610 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 TWNKQ96RR1 684 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 CYP2S1Q96SQ9 504 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 HNRNPABQ99729 332 aaKnown RBP14.18□□□□□ -0.14
SENP3-209ENST00000610454 NACA2Q9H009 215 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 GKN1Q9NS71 199 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 COMMD8Q9NX08 183 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 CCL26Q9Y258 94 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 COL4A2P08572 1712 aa14.18□□□□□ -0.14
SENP3-209ENST00000610454 ZNF840PA6NDX5 716 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 ARNTLO00327 626 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 P4HA2O15460 535 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 AFPP02771 609 aaKnown RBP14.17□□□□□ -0.14
SENP3-209ENST00000610454 IFNAR2P48551 515 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 AMPD2Q01433 879 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 TCF15Q12870 199 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 PDGFRLQ15198 375 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
SENP3-209ENST00000610454 PPM1KQ8N3J5 372 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 SCAMP5Q8TAC9 235 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 TMEM176AQ96HP8 235 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 LRRC3BQ96PB8 259 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 SMOQ99835 787 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 ARID3AQ99856 593 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 GTSE1Q9NYZ3 720 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 ARHGAP26Q9UNA1 814 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 PATJQ8NI35 1801 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 F5P12259 2224 aa14.17□□□□□ -0.14
SENP3-209ENST00000610454 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 SPECC1L-ADORA2AF8WAN1 911 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 PMM2O15305 246 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 MBL2P11226 248 aaPredicted RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 CD19P15391 556 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 MARSP56192 900 aaKnown RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 TNK2Q07912 1038 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 KCNH2Q12809 1159 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 ANGPT1Q15389 498 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 CLEC20AQ6ZU45 233 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
SENP3-209ENST00000610454 TRIM59Q8IWR1 403 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 CPA6Q8N4T0 437 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 SH3RF2Q8TEC5 729 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 EXOC4Q96A65 974 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 CNOT6LQ96LI5 555 aaKnown RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 SLC22A12Q96S37 553 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 EBF3Q9H4W6 596 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 TLR8Q9NR97 1041 aaKnown RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 LMBRD1Q9NUN5 540 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 SPATA6Q9NWH7 488 aaPredicted RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 DUS2Q9NX74 493 aaKnown RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 GCNT4Q9P109 453 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 HESX1Q9UBX0 185 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 MTF2Q9Y483 593 aaPredicted RBP14.16□□□□□ -0.14
SENP3-209ENST00000610454 CACNA1HO95180 2353 aa14.16□□□□□ -0.14
SENP3-209ENST00000610454 TNFRSF10BO14763 440 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 LAMTOR5O43504 91 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 BEST1O76090 585 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.14
SENP3-209ENST00000610454 CTHP32929 405 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 RPS9P46781 194 aaKnown RBP14.15□□□□□ -0.14
SENP3-209ENST00000610454 SOX9P48436 509 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 RAD23BP54727 409 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 USP4Q13107 963 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 RUNX3Q13761 415 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 LRRC32Q14392 662 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 ZNF77Q15935 545 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 SGO2Q562F6 1265 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 HECTD3Q5T447 861 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 C1orf210Q8IVY1 113 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
SENP3-209ENST00000610454 SLC4A11Q8NBS3 891 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms